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Cluster: A103.bin_16_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A103_contig_341 A103_contig_341_164 194557 196362 - GH2
TF A103_contig_341 A103_contig_341_165 196508 197536 - LacI
CAZyme A103_contig_341 A103_contig_341_166 197725 199236 - GH51_1
TC A103_contig_341 A103_contig_341_167 199314 200144 - 3.A.1.1.36
TC A103_contig_341 A103_contig_341_168 200141 201055 - 3.A.1.1.36
TC A103_contig_341 A103_contig_341_169 201249 202505 - 3.A.1.1.40
TC A103_contig_341 A103_contig_341_170 203924 205327 + 2.A.86.1.11
Gene ID: A103_contig_341_164
Type: CAZyme
Location: 194557 - 196362 (-)
Gene ID: A103_contig_341_165
Type: TF
Location: 196508 - 197536 (-)
Gene ID: A103_contig_341_166
Type: CAZyme
Location: 197725 - 199236 (-)
Gene ID: A103_contig_341_167
Type: TC
Location: 199314 - 200144 (-)
Gene ID: A103_contig_341_168
Type: TC
Location: 200141 - 201055 (-)
Gene ID: A103_contig_341_169
Type: TC
Location: 201249 - 202505 (-)
Gene ID: A103_contig_341_170
Type: TC
Location: 203924 - 205327 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A103_contig_341_166 vegetarian > vegan 1.26605 0.01591
A103_contig_341_167 vegetarian > vegan 1.22022 0.01591
A103_contig_341_169 vegetarian > omnivore 1.15035 0.04774
A103_contig_341_169 vegetarian > vegan 1.24278 0.01591

🧭 Explore Read Mapping of CGC

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