Cluster: A103.bin_16_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A103.bin_16
- CGC Family ID: CGCFAM_01499
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A103_contig_340 | A103_contig_340_22 | 20376 | 22184 | + | GH13_20 |
| STP | A103_contig_340 | A103_contig_340_23 | 22168 | 23418 | + | SBP_bac_1 |
| TC | A103_contig_340 | A103_contig_340_24 | 23453 | 24337 | + | 3.A.1.1.23 |
| TC | A103_contig_340 | A103_contig_340_25 | 24350 | 25195 | + | 3.A.1.1.44 |
Gene ID: A103_contig_340_22
Type: CAZyme
Location: 20376 - 22184 (+)
Type: CAZyme
Location: 20376 - 22184 (+)
Gene ID: A103_contig_340_23
Type: STP
Location: 22168 - 23418 (+)
Type: STP
Location: 22168 - 23418 (+)
Gene ID: A103_contig_340_24
Type: TC
Location: 23453 - 24337 (+)
Type: TC
Location: 23453 - 24337 (+)
Gene ID: A103_contig_340_25
Type: TC
Location: 24350 - 25195 (+)
Type: TC
Location: 24350 - 25195 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A103_contig_340_23 | vegan > omnivore | 2.23467 | 0.02628 |