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Cluster: A103.bin_16_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A103_contig_2645 A103_contig_2645_173 188540 189358 - GT2
TC A103_contig_2645 A103_contig_2645_174 189322 190698 - 9.B.18.1.3
pfam A103_contig_2645 A103_contig_2645_175 191046 191924 + YitT_membrane | DUF2179
pfam A103_contig_2645 A103_contig_2645_176 192315 193097 - ADI | DDAH_eukar
TC A103_contig_2645 A103_contig_2645_177 193234 193956 - 3.A.1.3.25
TC A103_contig_2645 A103_contig_2645_178 193943 194683 - 3.A.1.3.15
TC A103_contig_2645 A103_contig_2645_179 194860 195741 - 3.A.1.3.27
pfam A103_contig_2645 A103_contig_2645_180 196041 197099 - DBI_PRT
pfam A103_contig_2645 A103_contig_2645_181 197331 197606 - Trns_repr_metal
TC A103_contig_2645 A103_contig_2645_182 198041 198802 - 3.A.1.14.21
TC A103_contig_2645 A103_contig_2645_183 198799 199839 - 3.A.1.14.16
STP A103_contig_2645 A103_contig_2645_184 199982 201034 - Peripla_BP_2
TC A103_contig_2645 A103_contig_2645_185 201904 203262 - 2.A.66.1.33
TF A103_contig_2645 A103_contig_2645_186 203558 204475 + 0036286
TC A103_contig_2645 A103_contig_2645_187 205006 207345 + 9.B.34.1.4
Gene ID: A103_contig_2645_173
Type: CAZyme
Location: 188540 - 189358 (-)
Gene ID: A103_contig_2645_174
Type: TC
Location: 189322 - 190698 (-)
Gene ID: A103_contig_2645_175
Type: pfam
Location: 191046 - 191924 (+)
Gene ID: A103_contig_2645_176
Type: pfam
Location: 192315 - 193097 (-)
Gene ID: A103_contig_2645_177
Type: TC
Location: 193234 - 193956 (-)
Gene ID: A103_contig_2645_178
Type: TC
Location: 193943 - 194683 (-)
Gene ID: A103_contig_2645_179
Type: TC
Location: 194860 - 195741 (-)
Gene ID: A103_contig_2645_180
Type: pfam
Location: 196041 - 197099 (-)
Gene ID: A103_contig_2645_181
Type: pfam
Location: 197331 - 197606 (-)
Gene ID: A103_contig_2645_182
Type: TC
Location: 198041 - 198802 (-)
Gene ID: A103_contig_2645_183
Type: TC
Location: 198799 - 199839 (-)
Gene ID: A103_contig_2645_184
Type: STP
Location: 199982 - 201034 (-)
Gene ID: A103_contig_2645_185
Type: TC
Location: 201904 - 203262 (-)
Gene ID: A103_contig_2645_186
Type: TF
Location: 203558 - 204475 (+)
Gene ID: A103_contig_2645_187
Type: TC
Location: 205006 - 207345 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A103_contig_2645_173 vegetarian > vegan 1.49825 0.01591
A103_contig_2645_177 vegetarian > vegan 1.10825 0.01591
A103_contig_2645_178 vegetarian > omnivore 1.88271 0.04774
A103_contig_2645_181 vegetarian > vegan 2.38498 0.01591
A103_contig_2645_185 vegetarian > vegan 1.48318 0.01591
A103_contig_2645_187 vegetarian > vegan 1.05203 0.01591

🧭 Explore Read Mapping of CGC

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