Cluster: A103.bin_16_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A103.bin_16
- CGC Family ID: CGCFAM_02302
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A103_contig_1688 | A103_contig_1688_78 | 75160 | 77304 | + | 2.A.6.4.2 |
| STP | A103_contig_1688 | A103_contig_1688_79 | 77713 | 78963 | + | SBP_bac_1 |
| NULL(UNKNOWN) | A103_contig_1688 | A103_contig_1688_80 | 79111 | 79581 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A103_contig_1688 | A103_contig_1688_81 | 79650 | 79991 | + | 3.A.1.1.20 |
| TC | A103_contig_1688 | A103_contig_1688_82 | 79994 | 80824 | + | 3.A.1.1.39 |
| CAZyme | A103_contig_1688 | A103_contig_1688_83 | 81109 | 82752 | + | GH123 |
Gene ID: A103_contig_1688_78
Type: TC
Location: 75160 - 77304 (+)
Type: TC
Location: 75160 - 77304 (+)
Gene ID: A103_contig_1688_79
Type: STP
Location: 77713 - 78963 (+)
Type: STP
Location: 77713 - 78963 (+)
Gene ID: A103_contig_1688_80
Type:
Location: 79111 - 79581 (+)
Type:
Location: 79111 - 79581 (+)
Gene ID: A103_contig_1688_81
Type: TC
Location: 79650 - 79991 (+)
Type: TC
Location: 79650 - 79991 (+)
Gene ID: A103_contig_1688_82
Type: TC
Location: 79994 - 80824 (+)
Type: TC
Location: 79994 - 80824 (+)
Gene ID: A103_contig_1688_83
Type: CAZyme
Location: 81109 - 82752 (+)
Type: CAZyme
Location: 81109 - 82752 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.