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Cluster: A103.bin_16_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A103_contig_3532 A103_contig_3532_56 64546 66471 - GH20
pfam A103_contig_3532 A103_contig_3532_57 66729 67772 + ABC_sub_bind
TC A103_contig_3532 A103_contig_3532_58 67948 68628 + 3.A.1.34.1
NULL(UNKNOWN) A103_contig_3532 A103_contig_3532_59 68598 68876 + NULL(UNKNOWN)
[View Structural Homologs]
TC A103_contig_3532 A103_contig_3532_60 68869 69663 + 3.A.1.34.1
TC A103_contig_3532 A103_contig_3532_61 70063 70908 - 3.A.1.1.25
TC A103_contig_3532 A103_contig_3532_62 70914 71789 - 3.A.1.1.19
Gene ID: A103_contig_3532_56
Type: CAZyme
Location: 64546 - 66471 (-)
Gene ID: A103_contig_3532_57
Type: pfam
Location: 66729 - 67772 (+)
Gene ID: A103_contig_3532_58
Type: TC
Location: 67948 - 68628 (+)
Gene ID: A103_contig_3532_59
Type:
Location: 68598 - 68876 (+)
Gene ID: A103_contig_3532_60
Type: TC
Location: 68869 - 69663 (+)
Gene ID: A103_contig_3532_61
Type: TC
Location: 70063 - 70908 (-)
Gene ID: A103_contig_3532_62
Type: TC
Location: 70914 - 71789 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A103_contig_3532_56 vegetarian > vegan 1.28158 0.01591

🧭 Explore Read Mapping of CGC

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