Cluster: A103.bin_16_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A103.bin_16
- CGC Family ID: CGCFAM_01498
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A103_contig_733 | A103_contig_733_197 | 212522 | 214768 | + | 3.A.1.122.2 |
| pfam | A103_contig_733 | A103_contig_733_198 | 214765 | 216246 | + | FtsX |
| NULL(UNKNOWN) | A103_contig_733 | A103_contig_733_199 | 216341 | 217024 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A103_contig_733 | A103_contig_733_200 | 217035 | 218387 | + | GH51_2 |
Gene ID: A103_contig_733_197
Type: TC
Location: 212522 - 214768 (+)
Type: TC
Location: 212522 - 214768 (+)
Gene ID: A103_contig_733_198
Type: pfam
Location: 214765 - 216246 (+)
Type: pfam
Location: 214765 - 216246 (+)
Gene ID: A103_contig_733_199
Type:
Location: 216341 - 217024 (+)
Type:
Location: 216341 - 217024 (+)
Gene ID: A103_contig_733_200
Type: CAZyme
Location: 217035 - 218387 (+)
Type: CAZyme
Location: 217035 - 218387 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Choladousia
Species
Choladousia sp902363135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A103_contig_733_199 | vegetarian > vegan | 1.31893 | 0.01591 |
| A103_contig_733_200 | vegetarian > vegan | 1.18611 | 0.01591 |