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Cluster: A103.CMAG_2_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A103_contig_2093 A103_contig_2093_1271 1341599 1342615 + GT2
pfam A103_contig_2093 A103_contig_2093_1272 1342637 1343857 + Wzy_C
pfam A103_contig_2093 A103_contig_2093_1273 1343927 1345759 - Sulfatase
CAZyme A103_contig_2093 A103_contig_2093_1274 1345800 1346780 - GT9
CAZyme A103_contig_2093 A103_contig_2093_1275 1346845 1347654 + CE4
CAZyme A103_contig_2093 A103_contig_2093_1276 1347655 1348731 - GT4
TC A103_contig_2093 A103_contig_2093_1277 1349161 1350054 + 8.A.5.1.4
TC A103_contig_2093 A103_contig_2093_1278 1351535 1354309 + 1.B.23.1.3
pfam A103_contig_2093 A103_contig_2093_1279 1354408 1354512 + ESPR
TC A103_contig_2093 A103_contig_2093_1280 1354484 1360783 + 1.B.40.2.2
STP A103_contig_2093 A103_contig_2093_1281 1361821 1362405 + Pribosyltran
TC A103_contig_2093 A103_contig_2093_1282 1362416 1363738 + 2.A.40.2.1
Gene ID: A103_contig_2093_1271
Type: CAZyme
Location: 1341599 - 1342615 (+)
Gene ID: A103_contig_2093_1272
Type: pfam
Location: 1342637 - 1343857 (+)
Gene ID: A103_contig_2093_1273
Type: pfam
Location: 1343927 - 1345759 (-)
Gene ID: A103_contig_2093_1274
Type: CAZyme
Location: 1345800 - 1346780 (-)
Gene ID: A103_contig_2093_1275
Type: CAZyme
Location: 1346845 - 1347654 (+)
Gene ID: A103_contig_2093_1276
Type: CAZyme
Location: 1347655 - 1348731 (-)
Gene ID: A103_contig_2093_1277
Type: TC
Location: 1349161 - 1350054 (+)
Gene ID: A103_contig_2093_1278
Type: TC
Location: 1351535 - 1354309 (+)
Gene ID: A103_contig_2093_1279
Type: pfam
Location: 1354408 - 1354512 (+)
Gene ID: A103_contig_2093_1280
Type: TC
Location: 1354484 - 1360783 (+)
Gene ID: A103_contig_2093_1281
Type: STP
Location: 1361821 - 1362405 (+)
Gene ID: A103_contig_2093_1282
Type: TC
Location: 1362416 - 1363738 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A103_contig_2093_1274 vegetarian > omnivore 1.15088 0.00465
A103_contig_2093_1279 vegan > omnivore 1.69296 0.02609
A103_contig_2093_1281 vegetarian > omnivore 2.08515 0.00465

🧭 Explore Read Mapping of CGC

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