Cluster: A10.bin_10_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A10.bin_10
- CGC Family ID: CGCFAM_01508
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A10_contig_1802 | A10_contig_1802_100 | 110601 | 112130 | - | 3.A.1.12.8 |
| TC | A10_contig_1802 | A10_contig_1802_101 | 112127 | 112774 | - | 3.A.1.12.4 |
| TC | A10_contig_1802 | A10_contig_1802_102 | 112774 | 113886 | - | 3.A.1.12.4 |
| CAZyme | A10_contig_1802 | A10_contig_1802_103 | 114172 | 115437 | + | GT2 |
Gene ID: A10_contig_1802_100
Type: TC
Location: 110601 - 112130 (-)
Type: TC
Location: 110601 - 112130 (-)
Gene ID: A10_contig_1802_101
Type: TC
Location: 112127 - 112774 (-)
Type: TC
Location: 112127 - 112774 (-)
Gene ID: A10_contig_1802_102
Type: TC
Location: 112774 - 113886 (-)
Type: TC
Location: 112774 - 113886 (-)
Gene ID: A10_contig_1802_103
Type: CAZyme
Location: 114172 - 115437 (+)
Type: CAZyme
Location: 114172 - 115437 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A10_contig_1802_103 | vegetarian > vegan | 1.03526 | 0.00385 |