Cluster: A10.bin_10_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A10.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A10_contig_1926 | A10_contig_1926_23 | 27059 | 28219 | + | 2.A.86.1.3 |
| TC | A10_contig_1926 | A10_contig_1926_24 | 28360 | 29751 | + | 9.B.160.1.10 |
| CAZyme | A10_contig_1926 | A10_contig_1926_25 | 29894 | 32107 | - | GH26 |
| pfam | A10_contig_1926 | A10_contig_1926_26 | 32266 | 33081 | - | CN_hydrolase |
| TC | A10_contig_1926 | A10_contig_1926_27 | 33196 | 34692 | - | 2.A.80.1.4 |
Gene ID: A10_contig_1926_23
Type: TC
Location: 27059 - 28219 (+)
Type: TC
Location: 27059 - 28219 (+)
Gene ID: A10_contig_1926_24
Type: TC
Location: 28360 - 29751 (+)
Type: TC
Location: 28360 - 29751 (+)
Gene ID: A10_contig_1926_25
Type: CAZyme
Location: 29894 - 32107 (-)
Type: CAZyme
Location: 29894 - 32107 (-)
Gene ID: A10_contig_1926_26
Type: pfam
Location: 32266 - 33081 (-)
Type: pfam
Location: 32266 - 33081 (-)
Gene ID: A10_contig_1926_27
Type: TC
Location: 33196 - 34692 (-)
Type: TC
Location: 33196 - 34692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A10_contig_1926_23 | vegetarian > vegan | 1.35746 | 0.00385 |
| A10_contig_1926_26 | vegetarian > vegan | 1.27401 | 0.00385 |
| A10_contig_1926_27 | vegetarian > vegan | 1.32157 | 0.00385 |