Cluster: A10.bin_10_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A10.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A10_contig_20 | A10_contig_20_87 | 99041 | 99883 | + | GH166 |
| TF | A10_contig_20 | A10_contig_20_88 | 100001 | 100702 | - | Trans_reg_C |
| TC | A10_contig_20 | A10_contig_20_89 | 100695 | 102518 | - | 2.A.21.9.2 |
| TC | A10_contig_20 | A10_contig_20_90 | 102886 | 103533 | - | 2.A.38.4.4 |
| TC | A10_contig_20 | A10_contig_20_91 | 103547 | 104887 | - | 2.A.38.4.1 |
Gene ID: A10_contig_20_87
Type: CAZyme
Location: 99041 - 99883 (+)
Type: CAZyme
Location: 99041 - 99883 (+)
Gene ID: A10_contig_20_88
Type: TF
Location: 100001 - 100702 (-)
Type: TF
Location: 100001 - 100702 (-)
Gene ID: A10_contig_20_89
Type: TC
Location: 100695 - 102518 (-)
Type: TC
Location: 100695 - 102518 (-)
Gene ID: A10_contig_20_90
Type: TC
Location: 102886 - 103533 (-)
Type: TC
Location: 102886 - 103533 (-)
Gene ID: A10_contig_20_91
Type: TC
Location: 103547 - 104887 (-)
Type: TC
Location: 103547 - 104887 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A10_contig_20_87 | vegetarian > omnivore | 1.25989 | 0.00665 |
| A10_contig_20_87 | vegetarian > vegan | 1.67085 | 0.00385 |