Cluster: A10.bin_10_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A10.bin_10
- CGC Family ID: CGCFAM_01836
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A10_contig_572 | A10_contig_572_140 | 149967 | 151136 | - | GT4 |
| NULL(UNKNOWN) | A10_contig_572 | A10_contig_572_141 | 151250 | 151396 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A10_contig_572 | A10_contig_572_142 | 151393 | 153741 | - | 9.A.8.1.6 |
Gene ID: A10_contig_572_140
Type: CAZyme
Location: 149967 - 151136 (-)
Type: CAZyme
Location: 149967 - 151136 (-)
Gene ID: A10_contig_572_141
Type:
Location: 151250 - 151396 (-)
Type:
Location: 151250 - 151396 (-)
Gene ID: A10_contig_572_142
Type: TC
Location: 151393 - 153741 (-)
Type: TC
Location: 151393 - 153741 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A10_contig_572_140 | vegetarian > vegan | 1.22578 | 0.00385 |
| A10_contig_572_141 | vegetarian > vegan | 1.30469 | 0.00385 |