Cluster: A10.bin_10_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A10.bin_10
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A10_contig_2149 | A10_contig_2149_9 | 10706 | 11764 | - | 9.B.97.1.5 |
| pfam | A10_contig_2149 | A10_contig_2149_10 | 11816 | 13399 | - | FAD_binding_2 | FAD-depend_C |
| pfam | A10_contig_2149 | A10_contig_2149_11 | 14138 | 14764 | - | DUF1643 |
| CAZyme | A10_contig_2149 | A10_contig_2149_12 | 14968 | 16395 | + | GH25 |
Gene ID: A10_contig_2149_9
Type: TC
Location: 10706 - 11764 (-)
Type: TC
Location: 10706 - 11764 (-)
Gene ID: A10_contig_2149_10
Type: pfam
Location: 11816 - 13399 (-)
Type: pfam
Location: 11816 - 13399 (-)
Gene ID: A10_contig_2149_11
Type: pfam
Location: 14138 - 14764 (-)
Type: pfam
Location: 14138 - 14764 (-)
Gene ID: A10_contig_2149_12
Type: CAZyme
Location: 14968 - 16395 (+)
Type: CAZyme
Location: 14968 - 16395 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Lawsonibacter
Species
Lawsonibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A10_contig_2149_9 | vegetarian > vegan | 1.40981 | 0.00385 |
| A10_contig_2149_12 | vegetarian > vegan | 1.49772 | 0.00385 |