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Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa001354m |
Family | GT35 |
Protein Properties | Length: 847 Molecular Weight: 95939.1 Isoelectric Point: 7.6567 |
Chromosome | Chromosome/Scaffold: 6 Start: 431723 End: 437592 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 119 | 841 | 0 |
ALNKLGHDLEEIREQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQRIAKDGQEETAEDWLEKFSPWEVVRHDVVYPVRFFGRVHVNP DGSRNWVEGEVLQALAYDVPIPGYKTKNTISLRLWEAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDATEDGKLLRLKQQFFLCSASLQDII FRFKERKGSTASLQWSEFPTKVAVQLNDTHPTLAIPELMRLLLDEEGLGWDEAWAVTTRTIAYTNHTVLPEALEKWSQPVMWKLLPRHMQIIEEIDKRFI ATVHATRTDLVSKIPSLCILDNSPQKPVVRMANLCVVSAHTVNGVAQLHSDILKNELFVDYVSIWPSKFQNKTNGITPRRWLRFCSPELSNIITKWLKTD QWVTNLDLLTGLRKFADDSKLQEEWASAKLANKKRLAQYIEHTTGVQVDPSTLFDIQVKRIHEYKRQLLNILGAVYRYKKLKEMSPEERKKTTPRTIMIG GKAFATYTNAKRIVKLVDDVGAVVNKDPEVNTHLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIREEIGED NFFLFGATADEVPKLRKDRENGLFKPDPRFEEAKQFVRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGHDFPQYLDAQAKVDEAYKDRKKWLKMSILST AGSGKFSSDRTIAQYAKEIWNIE |
Full Sequence |
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Protein Sequence Length: 847 Download |
MAATAKPNGK SITDSDISSK IPATANPLAE EPSQIASNIN YHAKFSPHFS PFKFQPEQAY 60 YATADSVRDR LIQQWNETYL HFHKKNPKQT YYLSMEYLQG RALTNAIGNL NVQKAYADAL 120 NKLGHDLEEI REQEKDAALG NGGLGRLASC FLDSMATLNL PAWGYGLRYR YGLFKQRIAK 180 DGQEETAEDW LEKFSPWEVV RHDVVYPVRF FGRVHVNPDG SRNWVEGEVL QALAYDVPIP 240 GYKTKNTISL RLWEAKASAE DFNLFQFNDG QYESAAQLHS RAQQICAVLY PGDATEDGKL 300 LRLKQQFFLC SASLQDIIFR FKERKGSTAS LQWSEFPTKV AVQLNDTHPT LAIPELMRLL 360 LDEEGLGWDE AWAVTTRTIA YTNHTVLPEA LEKWSQPVMW KLLPRHMQII EEIDKRFIAT 420 VHATRTDLVS KIPSLCILDN SPQKPVVRMA NLCVVSAHTV NGVAQLHSDI LKNELFVDYV 480 SIWPSKFQNK TNGITPRRWL RFCSPELSNI ITKWLKTDQW VTNLDLLTGL RKFADDSKLQ 540 EEWASAKLAN KKRLAQYIEH TTGVQVDPST LFDIQVKRIH EYKRQLLNIL GAVYRYKKLK 600 EMSPEERKKT TPRTIMIGGK AFATYTNAKR IVKLVDDVGA VVNKDPEVNT HLKVVFVPNY 660 NVSVAELLIP GSELSQHIST AGMEASGTSN MKFSLNGCLI IGTLDGANVE IREEIGEDNF 720 FLFGATADEV PKLRKDRENG LFKPDPRFEE AKQFVRSGAF GSYDYNPLLD SLEGNTGYGR 780 GDYFLVGHDF PQYLDAQAKV DEAYKDRKKW LKMSILSTAG SGKFSSDRTI AQYAKEIWNI 840 EECRVP* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 36 | 840 | 814 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 39 | 840 | 810 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 119 | 842 | 729 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
COG0058 | GlgP | 0 | 56 | 841 | 791 | + Glucan phosphorylase [Carbohydrate transport and metabolism] | ||
PRK14985 | PRK14985 | 0 | 83 | 838 | 761 | + maltodextrin phosphorylase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM29154.1 | 0 | 3 | 845 | 2 | 839 | starch phosphorylase type H [Citrus hybrid cultivar] |
DDBJ | BAG31926.1 | 0 | 3 | 846 | 2 | 843 | alpha-1,4-glucan phosphorylase H isozyme [Cucurbita maxima] |
RefSeq | XP_002280732.1 | 0 | 3 | 846 | 2 | 843 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313399.1 | 0 | 3 | 846 | 4 | 853 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520435.1 | 0 | 1 | 846 | 1 | 849 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1z8d_A | 0 | 10 | 844 | 3 | 832 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 3t3i_A | 0 | 10 | 844 | 2 | 831 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 3t3h_A | 0 | 10 | 844 | 2 | 831 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 3t3g_A | 0 | 10 | 844 | 2 | 831 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 3t3e_A | 0 | 10 | 844 | 2 | 831 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782200 | 412 | 175 | 586 | 0 |
HO418036 | 541 | 245 | 762 | 0 |
HO613954 | 499 | 398 | 847 | 0 |
HO586252 | 552 | 293 | 843 | 0 |
GT044838 | 338 | 480 | 817 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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