y
Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.006G182300.1 |
Family | GT35 |
Protein Properties | Length: 999 Molecular Weight: 113027 Isoelectric Point: 6.8008 |
Chromosome | Chromosome/Scaffold: 06 Start: 29159313 End: 29175894 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 280 | 991 | 0 |
ALSQLGFEFEVLAEQEGDAALGNGGLARLSACQMDSLATLDYPAWGYGLRYEYGLFRQVIVEGFQHEQPDYWLNFGNPWEIERIHVTYEVKFYGTVEEAD LNGEKHQVWVPGETVEAVAYDNPIPGYGTRNTLNLRLWAAKPSNRFDLEAYNTGDYINSVVNRQRAETISNVLYPDDRNHQGKELRLKQQYFFVSASLQD IIRRFKEAHNNFDELPDKVALHLNDTHPSLSIAEIMRILVDEEHLGWNKAWDIACKVFSFTTHTVVAEGLEKIPVDLLGSLLPRHLQILYEINFNFMEEL KKKIGLDYNRLSRMSIVEEGAVKNIRMANLSIVGSHIVNGVSKLHLDTLKRTTFKDFYELWPEKFQFKTNGVTQRRWIVVSNPSLCALISKWLGTEAWIR NADLLTGLRDHVDNPNFHQEWKMVKKVNKMRLAEYIEAMSGVKVSLDAMFDVQVKRIHEYKRQLLNILGIIHRYDCLKNMDKNDRRKVVPRVCIIGGKAA PGYEIAKKIIKLCHSVAEKINNDTDIGDLLKLVFIPDYNVSVAELVIPGADLSQHLSTAGHEASGTGSMKFLMNGCLLLATADGSTVEIIEEIGSDNLFL FGAKVQEVAELREKISTLKVPLQFARVLRMVRDGYFGYKDYFKSLCDTVEIGKDFYLLGSDFGSYLEAQAAADKAFVEPEKWIKMSILSVSGSGRFSSDR TIQEYAERTWKI |
Full Sequence |
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Protein Sequence Length: 999 Download |
MQTLSFPLFT HSLSSLINPF SPFPSLSHFS SLSVSHVTAR RSIPLQASTR DSAFSSSPVA 60 VDNSDAGDST AFVIRARNRI GLLQVITRVF KVLGLTVDRA TVEFEGDFFV KKFFVTDSHG 120 NKIEDSDSLE RIKRALAEAV GGDGDGTVLV ARPAAGNPGV VVRRPGLVEG DGERRAKAER 180 MFSLMDGFLK NDPFSLQKDI LNHVEYTVAR SRFNFDDFEA YQALSHSVRD RLIERWHDTH 240 SYFKRTKPKR LYFLSLEFLM GRSLSNSVIN LGIQDQYAEA LSQLGFEFEV LAEQEGDAAL 300 GNGGLARLSA CQMDSLATLD YPAWGYGLRY EYGLFRQVIV EGFQHEQPDY WLNFGNPWEI 360 ERIHVTYEVK FYGTVEEADL NGEKHQVWVP GETVEAVAYD NPIPGYGTRN TLNLRLWAAK 420 PSNRFDLEAY NTGDYINSVV NRQRAETISN VLYPDDRNHQ GKELRLKQQY FFVSASLQDI 480 IRRFKEAHNN FDELPDKVAL HLNDTHPSLS IAEIMRILVD EEHLGWNKAW DIACKVFSFT 540 THTVVAEGLE KIPVDLLGSL LPRHLQILYE INFNFMEELK KKIGLDYNRL SRMSIVEEGA 600 VKNIRMANLS IVGSHIVNGV SKLHLDTLKR TTFKDFYELW PEKFQFKTNG VTQRRWIVVS 660 NPSLCALISK WLGTEAWIRN ADLLTGLRDH VDNPNFHQEW KMVKKVNKMR LAEYIEAMSG 720 VKVSLDAMFD VQVKRIHEYK RQLLNILGII HRYDCLKNMD KNDRRKVVPR VCIIGGKAAP 780 GYEIAKKIIK LCHSVAEKIN NDTDIGDLLK LVFIPDYNVS VAELVIPGAD LSQHLSTAGH 840 EASGTGSMKF LMNGCLLLAT ADGSTVEIIE EIGSDNLFLF GAKVQEVAEL REKISTLKVP 900 LQFARVLRMV RDGYFGYKDY FKSLCDTVEI GKDFYLLGSD FGSYLEAQAA ADKAFVEPEK 960 WIKMSILSVS GSGRFSSDRT IQEYAERTWK IDPSRCPL* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 197 | 991 | 801 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 200 | 991 | 804 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 280 | 993 | 720 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14986 | PRK14986 | 0 | 191 | 995 | 828 | + glycogen phosphorylase; Provisional | ||
COG0058 | GlgP | 0 | 195 | 993 | 810 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30609.1 | 0 | 185 | 997 | 1 | 813 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001757919.1 | 0 | 185 | 993 | 1 | 809 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002273615.1 | 0 | 181 | 997 | 1 | 817 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305114.1 | 0 | 181 | 998 | 1 | 818 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509431.1 | 0 | 1 | 998 | 1 | 949 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 196 | 993 | 44 | 877 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 196 | 993 | 44 | 877 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1c50_A | 0 | 196 | 995 | 15 | 819 | A Chain A, Identification And Structural Characterization Of A Novel Allosteric Binding Site Of Glycogen Phosphorylase B |
PDB | 2gj4_A | 0 | 196 | 995 | 16 | 820 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 1abb_D | 0 | 196 | 995 | 18 | 822 | A Chain A, Control Of Phosphorylase B Conformation By A Modified Cofactor: Crystallographic Studies On R-State Glycogen Phosphorylase Reconstituted With Pyridoxal 5'-Diphosphate |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779924 | 618 | 90 | 705 | 0 |
HO586252 | 545 | 456 | 998 | 0 |
HO802292 | 348 | 657 | 999 | 0 |
HO376977 | 448 | 553 | 999 | 0 |
HO779924 | 49 | 41 | 89 | 2e-16 |
Sequence Alignments (This image is cropped. Click for full image.) |
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