y
Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa000958m |
Family | GT35 |
Protein Properties | Length: 951 Molecular Weight: 107820 Isoelectric Point: 5.8212 |
Chromosome | Chromosome/Scaffold: 1 Start: 27568403 End: 27573617 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 164 | 945 | 0 |
ALKKLGHNLEDVARQEPDAALGNGGLGRLASCFLDSLATQNYPAWGYGLRYKYGLFKQHITKDGQEEVAENWLEMGNPWEIPRNDVSYPVKFYGEVVSGP DGNKQWIGGENVTAVAYDVPIPGYKTKTTVNLRLWSTKVAPEEFDLRAFNTGDHAKAYAAIKNAEKICYILYPGDESVEGKSLRLKQQYTLCSASLQDII ARFERRSGEPMKWEEFPEKVAVQMNDTHPTLCIPELIRILMDAKGLSWKEAWDITRRTVAYTNHTVLPEALEKWSLQLIQELLPRHVQIIKLIDEELIHT IIAEYGTEDLDLLVQKLREMRILDNIELPDSVLEILSKSEESSAVDHIEEVDKEAKATDEEAQSEGLNTEKKKEVTFEPDPKLPKMVRMANLCVAGGHAV NGVAEIHSEIVKNEVFNDFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSTIITKWTGTEDWVKDTEILVTLGKFADNEDIQSEWREAKRRNKIKVASFLKE KTGYLVNPDAMFDVQVKRIHEYKRQLLNILGIVYRYKKMKEMSPDERKARFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDQEIGDLLKVVFVPD YNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFAMNGCIQIGTLDGANVEIRQEVGEDNFFLFGAHAHEIAGLRNERAQGKFVADPRFEEVKAYVRSGV FGPYNYGELMGSLEGNEGYGRADYFLVGKDYPSYLECQDKVDEAYRDQKRWTKMSILNTAGSYKFSSDRTIHEYARDIWRIE |
Full Sequence |
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Protein Sequence Length: 951 Download |
MATLPTSAHS NLATQSKFIS SFIYSNTIRR NSRWLFISTF CSSRARRQLC VKTVATDQKD 60 AATQTQEGSL ATFPPDSASI ASIIKYHAEF TPSFSIESFG LPKAFYATAE SVRDMLIMNW 120 NETYEYYEKL NVKQAYYLSM EFLQGRALLN AVGNLELSGA YAEALKKLGH NLEDVARQEP 180 DAALGNGGLG RLASCFLDSL ATQNYPAWGY GLRYKYGLFK QHITKDGQEE VAENWLEMGN 240 PWEIPRNDVS YPVKFYGEVV SGPDGNKQWI GGENVTAVAY DVPIPGYKTK TTVNLRLWST 300 KVAPEEFDLR AFNTGDHAKA YAAIKNAEKI CYILYPGDES VEGKSLRLKQ QYTLCSASLQ 360 DIIARFERRS GEPMKWEEFP EKVAVQMNDT HPTLCIPELI RILMDAKGLS WKEAWDITRR 420 TVAYTNHTVL PEALEKWSLQ LIQELLPRHV QIIKLIDEEL IHTIIAEYGT EDLDLLVQKL 480 REMRILDNIE LPDSVLEILS KSEESSAVDH IEEVDKEAKA TDEEAQSEGL NTEKKKEVTF 540 EPDPKLPKMV RMANLCVAGG HAVNGVAEIH SEIVKNEVFN DFYKLWPEKF QNKTNGVTPR 600 RWIRFCNPDL STIITKWTGT EDWVKDTEIL VTLGKFADNE DIQSEWREAK RRNKIKVASF 660 LKEKTGYLVN PDAMFDVQVK RIHEYKRQLL NILGIVYRYK KMKEMSPDER KARFVPRVCI 720 FGGKAFATYV QAKRIVKFIT DVGATVNHDQ EIGDLLKVVF VPDYNVSVAE VLIPGSELSQ 780 HISTAGMEAS GTSNMKFAMN GCIQIGTLDG ANVEIRQEVG EDNFFLFGAH AHEIAGLRNE 840 RAQGKFVADP RFEEVKAYVR SGVFGPYNYG ELMGSLEGNE GYGRADYFLV GKDYPSYLEC 900 QDKVDEAYRD QKRWTKMSIL NTAGSYKFSS DRTIHEYARD IWRIEPVVLP * 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14985 | PRK14985 | 2.0e-139 | 548 | 942 | 403 | + maltodextrin phosphorylase; Provisional | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 84 | 944 | 870 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 84 | 944 | 866 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 164 | 946 | 788 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
COG0058 | GlgP | 0 | 107 | 946 | 847 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27267.1 | 0 | 30 | 950 | 33 | 933 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274575.1 | 0 | 30 | 950 | 33 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316098.1 | 0 | 1 | 950 | 1 | 953 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512108.1 | 0 | 1 | 950 | 1 | 973 | glycogen phosphorylase, putative [Ricinus communis] |
RefSeq | XP_002526085.1 | 0 | 6 | 950 | 7 | 977 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1z8d_A | 0 | 105 | 946 | 53 | 830 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 3nc4_A | 0 | 105 | 946 | 51 | 828 | A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibit |
PDB | 3t3i_A | 0 | 105 | 946 | 52 | 829 | A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibit |
PDB | 3t3h_A | 0 | 105 | 946 | 52 | 829 | A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibit |
PDB | 3t3g_A | 0 | 105 | 946 | 52 | 829 | A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibit |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778303 | 870 | 104 | 951 | 0 |
HO797178 | 401 | 551 | 951 | 0 |
HO613954 | 511 | 441 | 951 | 0 |
HO418036 | 579 | 290 | 865 | 0 |
HO778303 | 104 | 4 | 105 | 0.000005 |
Sequence Alignments (This image is cropped. Click for full image.) |
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