y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.139040.4 |
Family | GT35 |
Protein Properties | Length: 845 Molecular Weight: 95796.7 Isoelectric Point: 6.3636 |
Chromosome | Chromosome/Scaffold: 01066 Start: 262838 End: 271880 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 117 | 839 | 0 |
ALNKLGHDLEELVEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQRITKDGQEEIAEDWLEKFSPWEVVRHDVVFPVRFFGHVEVKP DGSRRWIGGEVVQALAYDVPIPGYKTKNTISLRLWEAKARADDFDLFQFNDGQYESAAQLHSRAQQICAVLYPGDATENGKLLRLKQQFFLCSASLQDII SRFKERKQGKDSREWTEFPSRVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTIAYTNHTVLPEALEKWSQHVMWKLLPRHMEIIEEIDKRFV AMIHAAQNNLEHKVDSLRILDNNPQKPVVRMANLCVVSAHSVNGVAQLHTDILKAELFEDYVTIWPKKFQNKTNGITPRRWLRFCNPDLSTIITKWLETE EWVTNLDLLVGLRKIADNADLQAEWASAKMASKVRLAQYIEQVTGISIDSNTLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPEDRKKTTPRTIMIG GKAFATYTNAKRIVKLVNDVGAVVNTDPEVNSYLKVVFVPNYNVSVAEKLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEE NFFLFGATADDVPRLRKEREGGLFKPDPRFEEAKQFIRSGAFGNYDYGPLLDSLEGNSGYGRGDYFLVGHDFSTYMDAQARVDEAYKDRKLWLKMSILST AGSGKFSSDRTIAQYAKEIWNIQ |
Full Sequence |
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Protein Sequence Length: 845 Download |
MSSGNSNGAT VVSTGSTKIP AVAHPLAEEP EDIASNIKYH AAYSPHFSLF KFEPEQAYYS 60 TADSVRDRLI QQWNETYLHY HKADPKQTYY LSMEYLQGRA LTNAIGNLNT QDAYADALNK 120 LGHDLEELVE QEKDAALGNG GLGRLASCFL DSMATLNLPA WGYGLRYRYG LFKQRITKDG 180 QEEIAEDWLE KFSPWEVVRH DVVFPVRFFG HVEVKPDGSR RWIGGEVVQA LAYDVPIPGY 240 KTKNTISLRL WEAKARADDF DLFQFNDGQY ESAAQLHSRA QQICAVLYPG DATENGKLLR 300 LKQQFFLCSA SLQDIISRFK ERKQGKDSRE WTEFPSRVAV QLNDTHPTLA IPELMRLLMD 360 EEGLGWDEAW DITTRTIAYT NHTVLPEALE KWSQHVMWKL LPRHMEIIEE IDKRFVAMIH 420 AAQNNLEHKV DSLRILDNNP QKPVVRMANL CVVSAHSVNG VAQLHTDILK AELFEDYVTI 480 WPKKFQNKTN GITPRRWLRF CNPDLSTIIT KWLETEEWVT NLDLLVGLRK IADNADLQAE 540 WASAKMASKV RLAQYIEQVT GISIDSNTLF DIQVKRIHEY KRQLLNILGA IYRYKKLKEM 600 SPEDRKKTTP RTIMIGGKAF ATYTNAKRIV KLVNDVGAVV NTDPEVNSYL KVVFVPNYNV 660 SVAEKLIPGS ELSQHISTAG MEASGTSNMK FALNGCLIIG TLDGANVEIR EEIGEENFFL 720 FGATADDVPR LRKEREGGLF KPDPRFEEAK QFIRSGAFGN YDYGPLLDSL EGNSGYGRGD 780 YFLVGHDFST YMDAQARVDE AYKDRKLWLK MSILSTAGSG KFSSDRTIAQ YAKEIWNIQE 840 CRVP* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 34 | 838 | 814 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 37 | 838 | 810 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 117 | 840 | 729 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14985 | PRK14985 | 0 | 90 | 836 | 755 | + maltodextrin phosphorylase; Provisional | ||
COG0058 | GlgP | 0 | 30 | 838 | 814 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM29154.1 | 0 | 1 | 843 | 1 | 839 | starch phosphorylase type H [Citrus hybrid cultivar] |
DDBJ | BAG31926.1 | 0 | 1 | 844 | 1 | 843 | alpha-1,4-glucan phosphorylase H isozyme [Cucurbita maxima] |
RefSeq | XP_002280732.1 | 0 | 1 | 844 | 1 | 843 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313399.1 | 0 | 6 | 844 | 15 | 853 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520435.1 | 0 | 1 | 844 | 6 | 849 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2ffr_A | 0 | 46 | 842 | 25 | 820 | A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylam |
PDB | 1z8d_A | 0 | 46 | 842 | 37 | 832 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 3l7d_A | 0 | 46 | 842 | 37 | 832 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 3l7c_A | 0 | 46 | 842 | 37 | 832 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 3l7b_A | 0 | 46 | 842 | 37 | 832 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782200 | 412 | 173 | 584 | 0 |
HO418036 | 539 | 243 | 760 | 0 |
HO586252 | 552 | 291 | 841 | 0 |
HO613954 | 499 | 396 | 845 | 0 |
HO620767 | 403 | 444 | 845 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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