y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000266061 |
Family | GT35 |
Protein Properties | Length: 792 Molecular Weight: 89854.7 Isoelectric Point: 6.6655 |
Chromosome | Chromosome/Scaffold: 002524249 Start: 3136 End: 8741 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 119 | 786 | 0 |
ALNKLGHQLEEITEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQRIAEDGQEETAEDWLEKFSPWEVVRHDVMYPVRFFGRVHVNP DGSRKWVEGEVLQALAYDVPIPGYKTKNTISLRLWEAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDATEEGKLLRLKQQFFLCSASLQDII FRFKERKQGTDTLXWSEFPKKVAVQMNDTHPTLAIPELMRLLLDEEGLGWDEAWEVTTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMQIIEEIDKRFI AMVRATRSDLESKIPSLCVLDNNPQKPVVRMANLCVVSAHTVNGVAQLHSDILKNELFVDYVSIWPTKFQNKTNGITPRRWLRFCSPELSNIITKWLKTD EWVTNLDLLVGLRKFADDSKLQEEWASAKMANKKRLXQYIEHVAGVKIDPNTLFDIQVKRIHEYKRQLLNILGAVYRYKKLKEMSPEDRKKTTPRTIMIG GKAFATYTNAKRIVKLVDDVGAVVNNDPDINSYLKVVFVPNYNVSVAEILIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGDD NFFLFGATADEVPKLRKDRENGLFKPDPRFEEAKQFVRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLV |
Full Sequence |
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Protein Sequence Length: 792 Download |
MAPTAKSNGK TITDSAISSK IPATANPLAE EPSQIASNIN YHAKFSPHFS PFKFEPEQAY 60 YATADSVRDR LIQQWNETYL HFHKENPKQT YYLSMEYLQG RALTNAIGNL NVQSAYADAL 120 NKLGHQLEEI TEQEKDAALG NGGLGRLASC FLDSMATLNL PAWGYGLRYR YGLFKQRIAE 180 DGQEETAEDW LEKFSPWEVV RHDVMYPVRF FGRVHVNPDG SRKWVEGEVL QALAYDVPIP 240 GYKTKNTISL RLWEAKASAE DFNLFQFNDG QYESAAQLHS RAQQICAVLY PGDATEEGKL 300 LRLKQQFFLC SASLQDIIFR FKERKQGTDT LXWSEFPKKV AVQMNDTHPT LAIPELMRLL 360 LDEEGLGWDE AWEVTTRTVA YTNHTVLPEA LEKWSQAVMW KLLPRHMQII EEIDKRFIAM 420 VRATRSDLES KIPSLCVLDN NPQKPVVRMA NLCVVSAHTV NGVAQLHSDI LKNELFVDYV 480 SIWPTKFQNK TNGITPRRWL RFCSPELSNI ITKWLKTDEW VTNLDLLVGL RKFADDSKLQ 540 EEWASAKMAN KKRLXQYIEH VAGVKIDPNT LFDIQVKRIH EYKRQLLNIL GAVYRYKKLK 600 EMSPEDRKKT TPRTIMIGGK AFATYTNAKR IVKLVDDVGA VVNNDPDINS YLKVVFVPNY 660 NVSVAEILIP GSELSQHIST AGMEASGTSN MKFALNGCLI IGTLDGANVE IREEIGDDNF 720 FLFGATADEV PKLRKDRENG LFKPDPRFEE AKQFVRSGAF GSYDYNPLLD SLEGNTGYGR 780 GDYFLVGHVS VT 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 36 | 788 | 762 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 39 | 788 | 758 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 119 | 788 | 675 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14985 | PRK14985 | 0 | 92 | 786 | 700 | + maltodextrin phosphorylase; Provisional | ||
PRK14986 | PRK14986 | 0 | 62 | 772 | 718 | + glycogen phosphorylase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM29154.1 | 0 | 5 | 788 | 4 | 782 | starch phosphorylase type H [Citrus hybrid cultivar] |
DDBJ | BAG31926.1 | 0 | 4 | 788 | 3 | 785 | alpha-1,4-glucan phosphorylase H isozyme [Cucurbita maxima] |
RefSeq | XP_002280732.1 | 0 | 1 | 788 | 1 | 785 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313399.1 | 0 | 1 | 788 | 1 | 795 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520435.1 | 0 | 1 | 788 | 1 | 791 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2ffr_A | 0 | 29 | 763 | 10 | 739 | A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylam |
PDB | 3nc4_A | 0 | 10 | 763 | 1 | 749 | A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibit |
PDB | 2gj4_A | 0 | 29 | 763 | 10 | 739 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 3t3i_A | 0 | 9 | 763 | 1 | 750 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 3t3h_A | 0 | 9 | 763 | 1 | 750 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782200 | 412 | 175 | 586 | 0 |
HO418036 | 540 | 245 | 762 | 0 |
FS996006 | 354 | 435 | 787 | 0 |
GT043461 | 324 | 465 | 788 | 0 |
GO883181 | 330 | 401 | 730 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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