y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_305.3 |
Family | GT4 |
Protein Properties | Length: 482 Molecular Weight: 54430.7 Isoelectric Point: 9.7843 |
Chromosome | Chromosome/Scaffold: 305 Start: 20144 End: 21589 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 301 | 440 | 1.1e-25 |
VLGIAGRLVKDKGHPLLYEAFSKLLRKYDDVFLIVAGSGPWQQRYRDLGPQVVVLGSVSPSQLKAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS RFPSIKGSIVVDDEFGYMFSPNVKSLMEALGEVVRDGTAR |
Full Sequence |
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Protein Sequence Length: 482 Download |
MAFNNKPKKQ NSINLCTTLF FITLFTIPAF FLLHTPISIS TTFTKPLLHK LWSGDLRHAH 60 FAWNRLSFPQ THPPISLKIA VFSRKWPLTT SPGGMERHAY TLHTALARRG HRIHVFTSPV 120 DEIESPSSIS PANNPYPRLH FHQGELGKWR YNKAWEQFGE ENQRQPFDVV HSESVALPHW 180 VARNVANLAV SWHGIALESL HSSIYQDLAR NPDETISPEF NKSLYGAVPK VLNEIRFFNN 240 YAHHVAISDS CGEMLRDVYQ IPVKRVHVIL NGVDENEFAE DKKLGRDFRS KLGISKNTSL 300 VLGIAGRLVK DKGHPLLYEA FSKLLRKYDD VFLIVAGSGP WQQRYRDLGP QVVVLGSVSP 360 SQLKAFYNAI DIFVNPTLRP QGLDLTLMEA MMSGKPVMAS RFPSIKGSIV VDDEFGYMFS 420 PNVKSLMEAL GEVVRDGTAR LAERGKACRR YAVSMFTANK MALAYERLFL CIKNEAFCSY 480 P* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd03807 | GT1_WbnK_like | 2.0e-36 | 92 | 469 | 393 | + This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. | ||
cd03811 | GT1_WabH_like | 1.0e-36 | 89 | 458 | 377 | + This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. | ||
TIGR00032 | argG | 1.0e-38 | 93 | 468 | 392 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
cd03798 | GT1_wlbH_like | 6.0e-44 | 79 | 469 | 408 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
cd03801 | GT1_YqgM_like | 6.0e-66 | 78 | 469 | 403 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002271072.1 | 0 | 34 | 481 | 37 | 493 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002271108.1 | 0 | 1 | 481 | 1 | 492 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303479.1 | 0 | 1 | 480 | 1 | 488 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326600.1 | 0 | 1 | 480 | 1 | 487 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519899.1 | 0 | 1 | 481 | 2 | 486 | glycosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3mbo_H | 0.000000004 | 57 | 469 | 16 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 3mbo_G | 0.000000004 | 57 | 469 | 16 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 3mbo_F | 0.000000004 | 57 | 469 | 16 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 3mbo_E | 0.000000004 | 57 | 469 | 16 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 3mbo_D | 0.000000004 | 57 | 469 | 16 | 402 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |