y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10013459m |
Family | GT4 |
Protein Properties | Length: 467 Molecular Weight: 52085.6 Isoelectric Point: 9.2783 |
Chromosome | Chromosome/Scaffold: 2 Start: 8553362 End: 8555520 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 275 | 423 | 9.5e-22 |
KRTPLVLGIAGRLVRDKGHPLMFSALKRVFEENKTARENVVVLVAGDGPWGNRYRDLGSNNVIVLGPLDQEKLAGFYNAIDVFVNPTLRAQGLDHTLLEA MVSGKPVLATRLASITGSVVVGPHLGYTFSPNVESLAEAISRVVSDGTE |
Full Sequence |
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Protein Sequence Length: 467 Download |
MARENSLMSF SFSFRYLCHF TLLLSLLSFV SFLFRHNTTL CSCPYDISPN AHTFDHRHSN 60 ETIDLLRFSS AWNHLTFFPS KPKKVLKIAV VVKKWPQKSQ AGGLERHALT LHLALANRGH 120 EVHVFTAASP SFPEYRLKNL RFHLSEPTAG GYLDQASVSQ ELQTFQSDII QELLRQADVA 180 ASAAVGAEEE QPPPSSPALT ERAKRVVEEV KFFQRYAHHV ATSDHCGDVL KRIYMIPEER 240 VHIILNGVDE SVFKPDVSKR ESFREKIGVR SGKNKRTPLV LGIAGRLVRD KGHPLMFSAL 300 KRVFEENKTA RENVVVLVAG DGPWGNRYRD LGSNNVIVLG PLDQEKLAGF YNAIDVFVNP 360 TLRAQGLDHT LLEAMVSGKP VLATRLASIT GSVVVGPHLG YTFSPNVESL AEAISRVVSD 420 GTEELQRKGK EARERSLRLF TASKMADAYE RLFLCISDKS FCTIQA* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR00032 | argG | 4.0e-30 | 110 | 452 | 371 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
cd03795 | GT1_like_4 | 2.0e-30 | 102 | 446 | 401 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. | ||
cd03807 | GT1_WbnK_like | 2.0e-34 | 211 | 453 | 250 | + This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. | ||
cd03798 | GT1_wlbH_like | 6.0e-38 | 102 | 453 | 386 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
cd03801 | GT1_YqgM_like | 7.0e-54 | 102 | 453 | 376 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB10782.1 | 0 | 1 | 466 | 1 | 521 | glycosyl transferase-like [Arabidopsis thaliana] |
EMBL | CBI16041.1 | 0 | 12 | 465 | 131 | 606 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200715.2 | 0 | 1 | 466 | 1 | 505 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
RefSeq | XP_002280256.1 | 0 | 1 | 465 | 1 | 484 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313414.1 | 0 | 71 | 458 | 1 | 411 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3c4v_B | 0.00002 | 96 | 453 | 16 | 402 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3c4v_A | 0.00002 | 96 | 453 | 16 | 402 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3c4q_B | 0.00002 | 96 | 453 | 16 | 402 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
PDB | 3c4q_A | 0.00002 | 96 | 453 | 16 | 402 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |
PDB | 3okp_A | 0.00002 | 246 | 383 | 170 | 308 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp |