y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10028797m |
Family | AA2 |
Protein Properties | Length: 327 Molecular Weight: 35466.6 Isoelectric Point: 8.2141 |
Chromosome | Chromosome/Scaffold: 3 Start: 4720213 End: 4721898 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 41 | 310 | 0 |
VQNLVNQHIGNVPSLAAGLIRMHFHDCFVRGCDGSILINATSRNQQVEKVSPPNLTVRGFDFIDLVKKVLESKCPGIVSCADIITLATRDSVAAIGGPTW SVPTGRRDGRISNANESLNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKARRCLSLADNTT KVEMDPGSRNTFDLSYFRLVLKRRGLFESDAALTMNSAALALVRRFAGGSEQDFFVEFGKSMEKMGRIGV |
Full Sequence |
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Protein Sequence Length: 327 Download |
MARFVLVFVT ILVILGSMSF SEAQLKIGFY DKTCPNAEKI VQNLVNQHIG NVPSLAAGLI 60 RMHFHDCFVR GCDGSILINA TSRNQQVEKV SPPNLTVRGF DFIDLVKKVL ESKCPGIVSC 120 ADIITLATRD SVAAIGGPTW SVPTGRRDGR ISNANESLNN IPPPFGNFTT LITLFGNQGL 180 DVKDLVLLSG AHTIGVSHCS SFSNRLFNFT GVGDQDPSLD SEYADNLKAR RCLSLADNTT 240 KVEMDPGSRN TFDLSYFRLV LKRRGLFESD AALTMNSAAL ALVRRFAGGS EQDFFVEFGK 300 SMEKMGRIGV KTGSDGEIRR TCAVVN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 3.0e-21 | 41 | 307 | 283 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 3.0e-63 | 41 | 194 | 155 | + Peroxidase. | ||
PLN03030 | PLN03030 | 1.0e-100 | 26 | 326 | 305 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 4.0e-167 | 24 | 325 | 302 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK93506.1 | 0 | 1 | 326 | 1 | 324 | unknown [Populus trichocarpa] |
EMBL | CAA67337.1 | 0 | 1 | 326 | 1 | 326 | peroxidase; peroxidase ATP19a [Arabidopsis thaliana] |
RefSeq | NP_192868.1 | 0 | 1 | 326 | 1 | 326 | peroxidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002309832.1 | 0 | 4 | 326 | 7 | 326 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327936.1 | 0 | 7 | 326 | 6 | 320 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 24 | 326 | 2 | 304 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 1pa2_A | 0 | 24 | 326 | 2 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3hdl_A | 0 | 25 | 326 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1qgj_B | 0 | 24 | 326 | 1 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1qgj_A | 0 | 24 | 326 | 1 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |