y
Basic Information | |
---|---|
Species | Sorghum bicolor |
Cazyme ID | Sb2674s002010.1 |
Family | AA2 |
Protein Properties | Length: 330 Molecular Weight: 35680.9 Isoelectric Point: 7.9933 |
Chromosome | Chromosome/Scaffold: 2674 Start: 1480 End: 2845 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA2 | 57 | 312 | 0 |
PSLAGPLLRLHFHDCFVRGCDASVLLDSTEGNLAERDAKPNKSLRGFGSVERVKAKLEAACPNTVSCADVLTLMARDAVVLAKGPSWPVALGRRDGRVSS ATEAAEQLPPAHGDIPLLTKIFASKGLDVKDLAVLSGAHTLGTAHCPSYAGRLYNYSSAYNADPSLDSEYADRLRTRCKSVDDRAMLSEMDPGSYKTFDT SYYRHVAKRRGLFQSDAALLTDATTREYVQRIATGKFDDVFFKDFSESMIKMGNVG |
Full Sequence |
---|
Protein Sequence Length: 330 Download |
MAIKHFVVML LPMALLLLAT GSSPVVAQLE LGYYSKTCPN AEAIVRAEME KIISAAPSLA 60 GPLLRLHFHD CFVRGCDASV LLDSTEGNLA ERDAKPNKSL RGFGSVERVK AKLEAACPNT 120 VSCADVLTLM ARDAVVLAKG PSWPVALGRR DGRVSSATEA AEQLPPAHGD IPLLTKIFAS 180 KGLDVKDLAV LSGAHTLGTA HCPSYAGRLY NYSSAYNADP SLDSEYADRL RTRCKSVDDR 240 AMLSEMDPGS YKTFDTSYYR HVAKRRGLFQ SDAALLTDAT TREYVQRIAT GKFDDVFFKD 300 FSESMIKMGN VGVITGADGE IRKKCYIVN* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 0.002 | 260 | 289 | 30 | + Peroxidase. | ||
cd00314 | plant_peroxidase_like | 3.0e-22 | 45 | 310 | 281 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 3.0e-64 | 45 | 196 | 153 | + Peroxidase. | ||
PLN03030 | PLN03030 | 1.0e-98 | 31 | 329 | 302 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 3.0e-170 | 28 | 325 | 298 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACL52390.1 | 0 | 27 | 329 | 32 | 338 | unknown [Zea mays] |
RefSeq | XP_002436932.1 | 0 | 21 | 329 | 30 | 339 | hypothetical protein SORBIDRAFT_10g011510 [Sorghum bicolor] |
RefSeq | XP_002436934.1 | 0 | 21 | 329 | 23 | 331 | hypothetical protein SORBIDRAFT_10g011530 [Sorghum bicolor] |
RefSeq | XP_002438300.1 | 0 | 1 | 329 | 5 | 332 | hypothetical protein SORBIDRAFT_10g011290 [Sorghum bicolor] |
RefSeq | XP_002488879.1 | 0 | 1 | 329 | 1 | 329 | hypothetical protein SORBIDRAFT_2674s002010 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 28 | 329 | 2 | 304 | A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 |
PDB | 1pa2_A | 0 | 28 | 329 | 2 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3hdl_A | 0 | 29 | 329 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1fhf_C | 0 | 28 | 329 | 1 | 303 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1fhf_B | 0 | 28 | 329 | 1 | 303 | A Chain A, The Structure Of Soybean Peroxidase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |