y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00035344m |
Family | AA2 |
Protein Properties | Length: 373 Molecular Weight: 38667.6 Isoelectric Point: 5.0562 |
Chromosome | Chromosome/Scaffold: 098035 Start: 752 End: 3490 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 64 | 322 | 0 |
FANDSGIAAGLIRMHFHDCFVRGCDASVLLTSPNNTAERDAAPNNPSLRGFQVIDAAKAAVEQSCPRTVSCADIVAFAARDSINLTGNLPYQVPSGRRDG NVSLDTDALNNLPPPTFNASQLVANFAAKNLTAEEMVILSGAHTVGRSFCTSFLNRIYNGSTPIVDSGLSSGYATLLRALCPSNANASTPTTTVMDLSTP AVLDNNYYKLLPLNLGLFFSDNQLRVNSTLNASVNSFAANETLWKEKFVAAMIKMGSIE |
Full Sequence |
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Protein Sequence Length: 373 Download |
MSPVASEGMA NGAAAVAAAA MAAAVALLCL QLPAVAQGQL QVGFYNTSCP NAESLVRQAV 60 ANAFANDSGI AAGLIRMHFH DCFVRGCDAS VLLTSPNNTA ERDAAPNNPS LRGFQVIDAA 120 KAAVEQSCPR TVSCADIVAF AARDSINLTG NLPYQVPSGR RDGNVSLDTD ALNNLPPPTF 180 NASQLVANFA AKNLTAEEMV ILSGAHTVGR SFCTSFLNRI YNGSTPIVDS GLSSGYATLL 240 RALCPSNANA STPTTTVMDL STPAVLDNNY YKLLPLNLGL FFSDNQLRVN STLNASVNSF 300 AANETLWKEK FVAAMIKMGS IEVLTGSQGQ IRLNCSVVNN GSSSSVAAPR IETTTAVPYS 360 GSTASLDEIA TS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 4.0e-24 | 54 | 320 | 297 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 3.0e-65 | 56 | 208 | 154 | + Peroxidase. | ||
PLN03030 | PLN03030 | 2.0e-74 | 37 | 332 | 303 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 2.0e-154 | 39 | 333 | 297 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH69257.1 | 0 | 30 | 372 | 19 | 356 | TPA: class III peroxidase 14 precursor [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY73797.1 | 0 | 30 | 372 | 19 | 375 | hypothetical protein OsI_01676 [Oryza sativa Indica Group] |
GenBank | EAY73798.1 | 0 | 30 | 372 | 19 | 356 | hypothetical protein OsI_01677 [Oryza sativa Indica Group] |
RefSeq | NP_001141196.1 | 0 | 1 | 372 | 1 | 368 | hypothetical protein LOC100273283 [Zea mays] |
RefSeq | XP_002455566.1 | 0 | 1 | 372 | 1 | 364 | hypothetical protein SORBIDRAFT_03g013200 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hdl_A | 0 | 40 | 339 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1sch_B | 0 | 39 | 339 | 1 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 39 | 339 | 1 | 294 | A Chain A, Peanut Peroxidase |
PDB | 3atj_B | 0 | 39 | 342 | 2 | 309 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3atj_A | 0 | 39 | 342 | 2 | 309 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |