y
Basic Information | |
---|---|
Species | Malus domestica |
Cazyme ID | MDP0000449389 |
Family | AA2 |
Protein Properties | Length: 418 Molecular Weight: 46051 Isoelectric Point: 9.5173 |
Chromosome | Chromosome/Scaffold: 012246295 Start: 1157 End: 7994 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA2 | 180 | 401 | 3.89561e-43 |
NQAEKDDPPNISVRSFYVIDDAKVKLEAACPHTVSCADIVGIAARDVVIMSGGPFWNXLKGRKDGRVSRANETINLPAPTFNXSQLIQSFAKRGLGXKDL VALSGGHTLGFSHCSSFESRLRNFSSVHDVDPTMNKEFAQKLRTKCSKPNRDITAGELLDSTSSTFDNNYYKQLVAGKGVFGSDQALFSDYRTGWIVESF AKDQSVFFKEFAASMVNLGNVG |
Full Sequence |
---|
Protein Sequence Length: 418 Download |
MTTVCRHRTM RWPVSIGSSA RSLGRRTRGI IEGALDQYGR KMVVWPENKE KKEIGHNQIK 60 NSFFAFPALQ SQDMVRGKIX MKRIENATSR QVTXSKRRNG LLKKAYEXSV LCDAEVAVII 120 FSQKDRLYEF SSSEXVEQIA SNLVASGGLV GVCNDAFHQG SKGLRNWINX MPXGDSTAGN 180 QAEKDDPPNI SVRSFYVIDD AKVKLEAACP HTVSCADIVG IAARDVVIMS GGPFWNXLKG 240 RKDGRVSRAN ETINLPAPTF NXSQLIQSFA KRGLGXKDLV ALSGGHTLGF SHCSSFESRL 300 RNFSSVHDVD PTMNKEFAQK LRTKCSKPNR DITAGELLDS TSSTFDNNYY KQLVAGKGVF 360 GSDQALFSDY RTGWIVESFA KDQSVFFKEF AASMVNLGNV GVIEDGGEVR LNCHVVN* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 0.0001 | 351 | 382 | 32 | + Peroxidase. | ||
cd00265 | MADS_MEF2_like | 4.0e-33 | 76 | 133 | 58 | + MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I subgroup mainly in position of the alpha helix responsible for the dimerization interface. Important in homeotic regulation in plants and in immediate-early development in animals. Also found in fungi. | ||
pfam00141 | peroxidase | 3.0e-42 | 180 | 287 | 109 | + Peroxidase. | ||
PLN03030 | PLN03030 | 8.0e-57 | 179 | 417 | 246 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 7.0e-130 | 175 | 416 | 243 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003677 | DNA binding |
GO:0003700 | sequence-specific DNA binding transcription factor activity |
GO:0004601 | peroxidase activity |
GO:0005634 | nucleus |
GO:0006355 | regulation of transcription, DNA-dependent |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN83265.1 | 0 | 175 | 417 | 60 | 301 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_200002.3 | 0 | 175 | 417 | 80 | 322 | peroxidase [Arabidopsis thaliana] |
RefSeq | XP_002264451.1 | 0 | 175 | 417 | 82 | 323 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268509.1 | 0 | 175 | 417 | 82 | 323 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002510864.1 | 0 | 175 | 417 | 82 | 323 | Peroxidase 66 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qgj_B | 0 | 179 | 417 | 57 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1qgj_A | 0 | 179 | 417 | 57 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3hdl_A | 0 | 175 | 417 | 56 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1fhf_C | 0 | 155 | 417 | 43 | 303 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1fhf_B | 0 | 155 | 417 | 43 | 303 | A Chain A, The Structure Of Soybean Peroxidase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EX775852 | 244 | 175 | 417 | 0 |
FK011018 | 219 | 175 | 393 | 0 |
GO013819 | 221 | 197 | 417 | 0 |
EL434177 | 226 | 175 | 400 | 0 |
DK545420 | 208 | 212 | 418 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|