y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g013220.1 |
Family | AA2 |
Protein Properties | Length: 372 Molecular Weight: 39016.9 Isoelectric Point: 7.3107 |
Chromosome | Chromosome/Scaffold: 3 Start: 16199051 End: 16202024 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 47 | 324 | 0 |
QQAVAAAFKNDSGIAAGLIRLHFHDCFVRGCDGSVLIDSTANNTAEKDAPPNNPSLRGFEVIDAAKAAIEAQCPKTVSCADILAFAARDSVALSSSSASG SGKNLTYKVPAGRRDGRVSRDTDANSNLPSPLSTAAELVGNFTRKNLTAEDMVVLSGAHTVGRSHCSSFTNRLYGFSNGSDVDPAISSAYAFLLRSICPS NTTRFFPPNTTTDMDLITPAVLDNKYYVGLTNNLGLFTSDQALLTNATLKKSVDEFVKSDSKWKSKFAKSMVKMGNIE |
Full Sequence |
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Protein Sequence Length: 372 Download |
MEAARSYFFV AAVAVVLIAL LPASAIAAGL KVGFYNKSCP SAEALVQQAV AAAFKNDSGI 60 AAGLIRLHFH DCFVRGCDGS VLIDSTANNT AEKDAPPNNP SLRGFEVIDA AKAAIEAQCP 120 KTVSCADILA FAARDSVALS SSSASGSGKN LTYKVPAGRR DGRVSRDTDA NSNLPSPLST 180 AAELVGNFTR KNLTAEDMVV LSGAHTVGRS HCSSFTNRLY GFSNGSDVDP AISSAYAFLL 240 RSICPSNTTR FFPPNTTTDM DLITPAVLDN KYYVGLTNNL GLFTSDQALL TNATLKKSVD 300 EFVKSDSKWK SKFAKSMVKM GNIEVLTGTQ GEIRLSCRVI NNGAGSSSSS AGLFELQMTT 360 DNSAQEESAA N* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 3.0e-25 | 60 | 322 | 296 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 1.0e-55 | 54 | 207 | 155 | + Peroxidase. | ||
PLN03030 | PLN03030 | 1.0e-72 | 31 | 341 | 316 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 3.0e-147 | 31 | 340 | 310 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001042908.1 | 0 | 31 | 341 | 27 | 326 | Os01g0327400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001140982.1 | 0 | 31 | 369 | 33 | 357 | hypothetical protein LOC100273061 [Zea mays] |
RefSeq | NP_001141388.1 | 0 | 13 | 341 | 9 | 332 | hypothetical protein LOC100273479 [Zea mays] |
RefSeq | XP_002440653.1 | 0 | 14 | 341 | 17 | 339 | hypothetical protein SORBIDRAFT_09g004660 [Sorghum bicolor] |
RefSeq | XP_002455568.1 | 0 | 1 | 371 | 1 | 371 | hypothetical protein SORBIDRAFT_03g013220 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hdl_A | 0 | 30 | 341 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1gx2_B | 0 | 34 | 341 | 7 | 306 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1gx2_A | 0 | 34 | 341 | 7 | 306 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 3atj_B | 0 | 34 | 341 | 7 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3atj_A | 0 | 34 | 341 | 7 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |