y
Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si028115m |
Family | AA1 |
Protein Properties | Length: 594 Molecular Weight: 66067.4 Isoelectric Point: 6.4406 |
Chromosome | Chromosome/Scaffold: 8 Start: 36263588 End: 36267104 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 22 | 569 | 0 |
AAVVEHTFVVSHMNMTHLCKETRVMVVNGQLPGPAIEVTEGDSVVVHVVNKSPYNMTIHWHGVKQQLNCWADGVPMITQRPILPNNNFTYRFDVSGQEGT LWWHAHVPLIRATVHGILIIRPGHGAVSYPFPKPHKEIPIIIGEWWSEDIAQVDTTVSYNSASTINGKLGDLYNCSGAMEQGYMMEVEPGEIYLLRVINA ALLSEYYLKIAGHKFTVVAADANYVSPYTTDIIAIAPGQTFDALVVADASPGRYYMVALPNQPPKPDFQSPVLPSRGILQYSNVAGGSQSGDVPMSPEMP DNHNNMLSFYFHGNLTNLHHPRHQPVPERIDERIFITLGLGSVCRNGRQSCKRGDNSLESLIVATMNSMSFLLPNVSTALLEARYYNTSNMDWLQELPDV PPRVFNFTDHSLIPAGPKEEKLEPSSRAALARRFRYGAVVEVVFQSTALMQSDSNPMHLHGHNMFVLAQGHGNYDMARDLARYNLVNPPVVNTVLVPRLG WVAVRFVADNPGIWYMHCHYEFHLTMGMVALFIVEDGQTTNTSLPSPP |
Full Sequence |
---|
Protein Sequence Length: 594 Download |
MHGCTTAAVI FFFFMTAFPA CAAVVEHTFV VSHMNMTHLC KETRVMVVNG QLPGPAIEVT 60 EGDSVVVHVV NKSPYNMTIH WHGVKQQLNC WADGVPMITQ RPILPNNNFT YRFDVSGQEG 120 TLWWHAHVPL IRATVHGILI IRPGHGAVSY PFPKPHKEIP IIIGEWWSED IAQVDTTVSY 180 NSASTINGKL GDLYNCSGAM EQGYMMEVEP GEIYLLRVIN AALLSEYYLK IAGHKFTVVA 240 ADANYVSPYT TDIIAIAPGQ TFDALVVADA SPGRYYMVAL PNQPPKPDFQ SPVLPSRGIL 300 QYSNVAGGSQ SGDVPMSPEM PDNHNNMLSF YFHGNLTNLH HPRHQPVPER IDERIFITLG 360 LGSVCRNGRQ SCKRGDNSLE SLIVATMNSM SFLLPNVSTA LLEARYYNTS NMDWLQELPD 420 VPPRVFNFTD HSLIPAGPKE EKLEPSSRAA LARRFRYGAV VEVVFQSTAL MQSDSNPMHL 480 HGHNMFVLAQ GHGNYDMARD LARYNLVNPP VVNTVLVPRL GWVAVRFVAD NPGIWYMHCH 540 YEFHLTMGMV ALFIVEDGQT TNTSLPSPPA DIQAYGNANN LMPDKYYLQN EER* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02604 | PLN02604 | 5.0e-63 | 7 | 567 | 593 | + oxidoreductase | ||
PLN02191 | PLN02191 | 1.0e-63 | 20 | 554 | 573 | + L-ascorbate oxidase | ||
TIGR03388 | ascorbase | 8.0e-75 | 24 | 553 | 563 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 2.0e-171 | 22 | 572 | 560 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001064399.1 | 0 | 26 | 572 | 42 | 599 | Os10g0346300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130676.1 | 0 | 22 | 558 | 26 | 578 | hypothetical protein LOC100191779 [Zea mays] |
RefSeq | NP_001146681.1 | 0 | 26 | 558 | 42 | 585 | hypothetical protein LOC100280281 [Zea mays] |
RefSeq | XP_002449982.1 | 0 | 22 | 558 | 29 | 581 | hypothetical protein SORBIDRAFT_05g026630 [Sorghum bicolor] |
RefSeq | XP_002457562.1 | 0 | 22 | 572 | 28 | 590 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 22 | 553 | 1 | 521 | A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution |
PDB | 1asq_A | 0 | 22 | 553 | 1 | 521 | A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution |
PDB | 1asp_B | 0 | 22 | 553 | 1 | 521 | A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution |
PDB | 1asp_A | 0 | 22 | 553 | 1 | 521 | A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution |
PDB | 1aso_B | 0 | 22 | 553 | 1 | 521 | A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution |