y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb05g025570.1 |
Family | AA1 |
Protein Properties | Length: 602 Molecular Weight: 66657.8 Isoelectric Point: 6.4723 |
Chromosome | Chromosome/Scaffold: 5 Start: 58861750 End: 58865331 |
Description | laccase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 27 | 585 | 0 |
AAVVEHTFVVHEMNVTHLCNTTKIYVVNGQFPGPQIDVTDGDTVVVHVVNRLDHGLTIHWHGVRQLRSCWSDGAGFVTECPIPPGADHTYRFNLTGQVGT LWWHAHVTCLRATINGAFVIRPKDGTNYPFRRTTTPPAKDVPIVIGEWWQLDLVELDRRMADGNFDDNPLSATINGKLGDLSNCSGVPEESFVLDVERGE TYLLRIINTALFSEYYFKVAGHTFTVVGADGNYLTPFETDMVTVAPGETIDVLMTADAPPAHYHMVALANQPPEPDPQIPVFVSRGLVRYAGVVRGGDNN GRVPVPPAAVPVMPDQHNTMPSYYFHGNLTGLAYPERHRVPMNVDERLFVTLGLGSLCRGGKKVCKRRRSEETIVVATMNNVSFHHPNTTSLLEVYYDSG NGTGVYTEDFPEKPPHPYNYTNRELIPPGPLEEVLEPTFKATKLRRFKYNTTVEIVFQSTALLQSDSNPMHLHGYDFFVLAQGLGNFDPKRDVAKFNYHN PQLRNTVQVPRTGWAAIRFVTDNPGMWYLHCHFEFHIVMGMATAFIVENGPTPETSLPP |
Full Sequence |
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Protein Sequence Length: 602 Download |
MGKVSMAALI LCVSLLALST AVSIGEAAVV EHTFVVHEMN VTHLCNTTKI YVVNGQFPGP 60 QIDVTDGDTV VVHVVNRLDH GLTIHWHGVR QLRSCWSDGA GFVTECPIPP GADHTYRFNL 120 TGQVGTLWWH AHVTCLRATI NGAFVIRPKD GTNYPFRRTT TPPAKDVPIV IGEWWQLDLV 180 ELDRRMADGN FDDNPLSATI NGKLGDLSNC SGVPEESFVL DVERGETYLL RIINTALFSE 240 YYFKVAGHTF TVVGADGNYL TPFETDMVTV APGETIDVLM TADAPPAHYH MVALANQPPE 300 PDPQIPVFVS RGLVRYAGVV RGGDNNGRVP VPPAAVPVMP DQHNTMPSYY FHGNLTGLAY 360 PERHRVPMNV DERLFVTLGL GSLCRGGKKV CKRRRSEETI VVATMNNVSF HHPNTTSLLE 420 VYYDSGNGTG VYTEDFPEKP PHPYNYTNRE LIPPGPLEEV LEPTFKATKL RRFKYNTTVE 480 IVFQSTALLQ SDSNPMHLHG YDFFVLAQGL GNFDPKRDVA KFNYHNPQLR NTVQVPRTGW 540 AAIRFVTDNP GMWYLHCHFE FHIVMGMATA FIVENGPTPE TSLPPPPPEY KRCGANGLSQ 600 P* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03388 | ascorbase | 6.0e-35 | 45 | 288 | 263 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
pfam07731 | Cu-oxidase_2 | 6.0e-36 | 435 | 576 | 142 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
pfam07732 | Cu-oxidase_3 | 2.0e-37 | 35 | 151 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
TIGR03389 | laccase | 4.0e-171 | 27 | 576 | 557 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | A2XCN6 | 0 | 26 | 601 | 28 | 595 | LAC18_ORYSI RecName: Full=Putative laccase-18; AltName: Full=Benzenediol:oxygen oxidoreductase 18; AltName: Full=Urishiol oxidase 18; AltName: Full=Diphenol oxidase 18; Flags: Precursor |
Swiss-Prot | A2Y9C5 | 0 | 1 | 601 | 1 | 590 | LAC19_ORYSI RecName: Full=Putative laccase-19; AltName: Full=Benzenediol:oxygen oxidoreductase 19; AltName: Full=Urishiol oxidase 19; AltName: Full=Diphenol oxidase 19; Flags: Precursor |
RefSeq | NP_001067650.1 | 0 | 1 | 601 | 1 | 595 | Os11g0264000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001068353.1 | 0 | 1 | 601 | 1 | 590 | Os11g0641500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002449914.1 | 0 | 1 | 601 | 1 | 601 | hypothetical protein SORBIDRAFT_05g025570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 45 | 571 | 19 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1asq_A | 0 | 45 | 571 | 19 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1asp_B | 0 | 45 | 571 | 19 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1asp_A | 0 | 45 | 571 | 19 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 1aso_B | 0 | 45 | 571 | 19 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |