| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g039970.1 |
| Family | AA1 |
| Protein Properties | Length: 650 Molecular Weight: 68089.4 Isoelectric Point: 6.3341 |
| Chromosome | Chromosome/Scaffold: 3 Start: 67609617 End: 67613678 |
| Description | laccase 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 22 | 541 | 0 |
| AATAKYTFTVGSMQINQLCSSTSIIAVNGQLPGPSIEVNEGDDVVVKVVNNSPYNITIHWHGVLQLMTPWADGPSMVTQCPIQPSSSYTYRFSVPGQEGT LWWHAHSSFLRATVYGAFIIRPRRGNAYPFPAPDKEVPIVLGEWWNRNVVDVESDAILAGQLPTQSDAFTVNGKTGLLYQCANETFTAVVEPNTRVLLRV INAGLNSHLFFKVAGHNFTVVAVDAGYTANLNTDTLVLAPGQTVDALVTTNAAPGSYYMAVLAHDTMSPLTFAASDTTTATAIFQYNGTSTNPPAMPTMP SSSDAGTANAFYFGLRGLGTPAVPSPVDVSMTIELGLGQLPCDPSQTRCNGTAAAAAMNGVSFRLPSPETSLLGAHVDGVTGVFTADFPDGPPPSGTAMS VGTKLKKLSYNSVVEIVLQNPAAVPTENHPIHLHGFNFFVLAQGMGSFTPGSVAYNLVDPVARNTIAVPGGGWAVIRFVANNPGMWFFHCHLDPHVPMGL GMVFQVESGTTPGSTLPTPP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 650 Download |
| MVQLLLALAL AILLVGVPVA DAATAKYTFT VGSMQINQLC SSTSIIAVNG QLPGPSIEVN 60 EGDDVVVKVV NNSPYNITIH WHGVLQLMTP WADGPSMVTQ CPIQPSSSYT YRFSVPGQEG 120 TLWWHAHSSF LRATVYGAFI IRPRRGNAYP FPAPDKEVPI VLGEWWNRNV VDVESDAILA 180 GQLPTQSDAF TVNGKTGLLY QCANETFTAV VEPNTRVLLR VINAGLNSHL FFKVAGHNFT 240 VVAVDAGYTA NLNTDTLVLA PGQTVDALVT TNAAPGSYYM AVLAHDTMSP LTFAASDTTT 300 ATAIFQYNGT STNPPAMPTM PSSSDAGTAN AFYFGLRGLG TPAVPSPVDV SMTIELGLGQ 360 LPCDPSQTRC NGTAAAAAMN GVSFRLPSPE TSLLGAHVDG VTGVFTADFP DGPPPSGTAM 420 SVGTKLKKLS YNSVVEIVLQ NPAAVPTENH PIHLHGFNFF VLAQGMGSFT PGSVAYNLVD 480 PVARNTIAVP GGGWAVIRFV ANNPGMWFFH CHLDPHVPMG LGMVFQVESG TTPGSTLPTP 540 PGDWVGVCDA QHYAAAAAVA AAPVPVPAPA QAPTLAPAPA ESPRTAGSPR QSPRAVDHKP 600 SPNLPQHKEH TGTSGSSNSA AGPGRRSTGN LACFLCYVLL LFVLHEHMA* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 7.0e-44 | 45 | 507 | 482 | + copper ion binding / oxidoreductase | ||
| PLN02191 | PLN02191 | 6.0e-60 | 20 | 525 | 544 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-60 | 15 | 526 | 558 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 4.0e-68 | 40 | 525 | 533 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 22 | 528 | 528 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL73970.1 | 0 | 23 | 543 | 38 | 559 | AF465470_1 laccase LAC5-4 [Lolium perenne] |
| GenBank | EEC71811.1 | 0 | 19 | 543 | 25 | 555 | hypothetical protein OsI_04449 [Oryza sativa Indica Group] |
| RefSeq | NP_001044815.1 | 0 | 19 | 543 | 25 | 555 | Os01g0850700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105789.1 | 0 | 1 | 649 | 1 | 641 | laccase 1 [Zea mays] |
| RefSeq | XP_002456640.1 | 0 | 25 | 649 | 25 | 649 | hypothetical protein SORBIDRAFT_03g039970 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 27 | 525 | 6 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asq_A | 0 | 27 | 525 | 6 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_B | 0 | 27 | 525 | 6 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_A | 0 | 27 | 525 | 6 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1aso_B | 0 | 27 | 525 | 6 | 521 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
