| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb03g009410.1 |
| Family | AA1 |
| Protein Properties | Length: 599 Molecular Weight: 66222.5 Isoelectric Point: 6.791 |
| Chromosome | Chromosome/Scaffold: 3 Start: 10141579 End: 10146189 |
| Description | laccase 7 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 28 | 586 | 0 |
| AAVVEHTFVVKQVYMRHLCNDTLATVVNGQFPGPPVEATEGDTVIVHLVNESPFEITIHWHGVKQRLTCWADGAGMVTQCPIQPNSTFTYRFKVDGQEGT LWWHSHVSILRATLHGIIIIRPKSGSYPFKNQPHMDVPIIISEWWQRDLMKVDKNFSNGGSFSDNPAGATINGKLGDQYNCSGVVEDNFVLNVERGKTYL LRLVNGALFSEYYFKVAGHKFTVVGADANYITPYTTDVVAIAPGETFDVLMVADAPPCRYYMAALANQPPAPDPQIPVFASRGIVQYTDMDRCRTQAPPP MPEMPDQHDTTTTFYFHGNLSGLPTHPLLPQLRGRIDEHLFVTLGKGTVCRDDKPSCKRGGSDEAVEVAYMNNVSFRLPDKMSLLEARQYEYGGGGNDVA AVVVEELPTRPPSVFNFTDPALIPVGPGAPLEKLEATRKATTVRRFRHNATVEVVFQSTATMQSDSNPMHLHGHDFFVLAQGHGNYDRARHVRTYNLVDP LLKNTVQVPRLGWAAVRFVADNPGAWFMHCHFEFHIAMGMATVFEVANGATPEDTLPPP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 599 Download |
| MSKMLPMAAA LFFFYAAVAL LRAAGSQAAV VEHTFVVKQV YMRHLCNDTL ATVVNGQFPG 60 PPVEATEGDT VIVHLVNESP FEITIHWHGV KQRLTCWADG AGMVTQCPIQ PNSTFTYRFK 120 VDGQEGTLWW HSHVSILRAT LHGIIIIRPK SGSYPFKNQP HMDVPIIISE WWQRDLMKVD 180 KNFSNGGSFS DNPAGATING KLGDQYNCSG VVEDNFVLNV ERGKTYLLRL VNGALFSEYY 240 FKVAGHKFTV VGADANYITP YTTDVVAIAP GETFDVLMVA DAPPCRYYMA ALANQPPAPD 300 PQIPVFASRG IVQYTDMDRC RTQAPPPMPE MPDQHDTTTT FYFHGNLSGL PTHPLLPQLR 360 GRIDEHLFVT LGKGTVCRDD KPSCKRGGSD EAVEVAYMNN VSFRLPDKMS LLEARQYEYG 420 GGGNDVAAVV VEELPTRPPS VFNFTDPALI PVGPGAPLEK LEATRKATTV RRFRHNATVE 480 VVFQSTATMQ SDSNPMHLHG HDFFVLAQGH GNYDRARHVR TYNLVDPLLK NTVQVPRLGW 540 AAVRFVADNP GAWFMHCHFE FHIAMGMATV FEVANGATPE DTLPPPPSDL PKCIHKKE* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 2.0e-25 | 464 | 571 | 111 | + L-ascorbate oxidase | ||
| PLN02191 | PLN02191 | 1.0e-47 | 30 | 358 | 353 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 4.0e-83 | 33 | 572 | 571 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-93 | 30 | 572 | 579 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 7.0e-180 | 33 | 593 | 565 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL73969.1 | 0 | 32 | 580 | 26 | 559 | AF465469_1 laccase LAC2-1 [Lolium perenne] |
| RefSeq | NP_001068353.1 | 0 | 1 | 576 | 1 | 565 | Os11g0641500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130676.1 | 0 | 23 | 598 | 21 | 601 | hypothetical protein LOC100191779 [Zea mays] |
| RefSeq | XP_002449914.1 | 0 | 9 | 576 | 7 | 576 | hypothetical protein SORBIDRAFT_05g025570 [Sorghum bicolor] |
| RefSeq | XP_002457562.1 | 0 | 1 | 598 | 1 | 598 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 571 | 1 | 521 | A Chain A, Modulating The Function Of Human Serine Racemase And Human Serine Dehydratase By Protein Engineering |
| PDB | 1asq_A | 0 | 28 | 571 | 1 | 521 | A Chain A, Modulating The Function Of Human Serine Racemase And Human Serine Dehydratase By Protein Engineering |
| PDB | 1asp_B | 0 | 28 | 571 | 1 | 521 | A Chain A, Modulating The Function Of Human Serine Racemase And Human Serine Dehydratase By Protein Engineering |
| PDB | 1asp_A | 0 | 28 | 571 | 1 | 521 | A Chain A, Modulating The Function Of Human Serine Racemase And Human Serine Dehydratase By Protein Engineering |
| PDB | 1aso_B | 0 | 28 | 571 | 1 | 521 | A Chain A, Modulating The Function Of Human Serine Racemase And Human Serine Dehydratase By Protein Engineering |
