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Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00043455m |
Family | AA1 |
Protein Properties | Length: 473 Molecular Weight: 52192.8 Isoelectric Point: 6.3722 |
Chromosome | Chromosome/Scaffold: 030576 Start: 4430 End: 6801 |
Description | laccase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 31 | 430 | 0 |
AAVVEHTFVVSQVKMTRLCNETLVTLANGQFPGPAIEVTDGESVTVHVVNKSPYNLTIHWHGVKQRLNCWADGVPMITQCPILPNHNFTYRFDVAGQEGT LWWHAHVAFLQATVHGALVIRPRHGASSYPFPKPYKEIPIIIGEWWQMDLEQADSGIAHGVDLYFGASTINGKLGDLYNCSGSIEDGYMLDVEPGKTYLL RVINAALFVRQVLPKDCWPQVHDVIAIAPGETMDALVVADAAPGRYYMVALPNQSPEPDPQSPILVTRGVVQYHRAQAPAIDTPVSPEMPDQDDLMPSFH FHANLTGLLHHPQRTPVPTQVDERLFITLGLGTICRQGQSCKRSQSNETVTVATMNNISFRQPAVNAPLLELHYHNANGMDMLQELPDKAPRVFNYTDPA |
Full Sequence |
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Protein Sequence Length: 473 Download |
MKCWNLPDAS TAITIAAVFF LYAIVPPAAM AAVVEHTFVV SQVKMTRLCN ETLVTLANGQ 60 FPGPAIEVTD GESVTVHVVN KSPYNLTIHW HGVKQRLNCW ADGVPMITQC PILPNHNFTY 120 RFDVAGQEGT LWWHAHVAFL QATVHGALVI RPRHGASSYP FPKPYKEIPI IIGEWWQMDL 180 EQADSGIAHG VDLYFGASTI NGKLGDLYNC SGSIEDGYML DVEPGKTYLL RVINAALFVR 240 QVLPKDCWPQ VHDVIAIAPG ETMDALVVAD AAPGRYYMVA LPNQSPEPDP QSPILVTRGV 300 VQYHRAQAPA IDTPVSPEMP DQDDLMPSFH FHANLTGLLH HPQRTPVPTQ VDERLFITLG 360 LGTICRQGQS CKRSQSNETV TVATMNNISF RQPAVNAPLL ELHYHNANGM DMLQELPDKA 420 PRVFNYTDPA LIPPGPKEAK LEPTSKAALA RCFRQGAVVE VVDSQIWHLL RST 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 1.0e-28 | 36 | 349 | 343 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-33 | 49 | 394 | 382 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
PLN02354 | PLN02354 | 4.0e-34 | 54 | 321 | 297 | + copper ion binding / oxidoreductase | ||
pfam07732 | Cu-oxidase_3 | 1.0e-46 | 39 | 155 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
TIGR03389 | laccase | 8.0e-110 | 36 | 427 | 415 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001064399.1 | 0 | 35 | 462 | 42 | 491 | Os10g0346300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130676.1 | 0 | 28 | 462 | 23 | 484 | hypothetical protein LOC100191779 [Zea mays] |
RefSeq | NP_001146681.1 | 0 | 35 | 462 | 42 | 491 | hypothetical protein LOC100280281 [Zea mays] |
RefSeq | XP_002449982.1 | 0 | 31 | 462 | 29 | 487 | hypothetical protein SORBIDRAFT_05g026630 [Sorghum bicolor] |
RefSeq | XP_002457562.1 | 0 | 28 | 462 | 25 | 482 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 3e-29 | 49 | 357 | 19 | 349 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asq_A | 3e-29 | 49 | 357 | 19 | 349 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_B | 3e-29 | 49 | 357 | 19 | 349 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_A | 3e-29 | 49 | 357 | 19 | 349 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1aso_B | 3e-29 | 49 | 357 | 19 | 349 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |