y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_10431378g0010 |
Family | GH19 |
Protein Properties | Length: 230 Molecular Weight: 24632.1 Isoelectric Point: 4.3175 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH19 | 28 | 230 | 0 |
VSDIATEDFFNGILSAATDGCAGKTFYTYTDFINAASSFSSFGTTGTSDDNKREIAAFFANVAHETTNLCYVEEIAKSDYCSSNTQYPCASGQQYYGRGP LQLTGNANYGAAGTYLSADLLNNPGLVAQDDLTSWKTALWFWNVNSNCHTAITSGQGFGATIQAINGAVECNGGNPDQVNDRISRYTNYCSQFGVDPGSN LSC |
Full Sequence |
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Protein Sequence Length: 230 Download |
MATHFRVNVI FLWLAFALSA LSICRGAVSD IATEDFFNGI LSAATDGCAG KTFYTYTDFI 60 NAASSFSSFG TTGTSDDNKR EIAAFFANVA HETTNLCYVE EIAKSDYCSS NTQYPCASGQ 120 QYYGRGPLQL TGNANYGAAG TYLSADLLNN PGLVAQDDLT SWKTALWFWN VNSNCHTAIT 180 SGQGFGATIQ AINGAVECNG GNPDQVNDRI SRYTNYCSQF GVDPGSNLSC 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00442 | lysozyme_like | 3.0e-6 | 115 | 169 | 55 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
COG3179 | COG3179 | 1.0e-8 | 77 | 213 | 172 | + Predicted chitinase [General function prediction only] | ||
pfam00182 | Glyco_hydro_19 | 1.0e-73 | 31 | 230 | 232 | + Chitinase class I. | ||
cd00325 | chitinase_glyco_hydro_19 | 2.0e-82 | 33 | 230 | 229 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK21750.1 | 0 | 1 | 230 | 1 | 230 | unknown [Picea sitchensis] |
GenBank | ABK22545.1 | 0 | 1 | 230 | 1 | 231 | unknown [Picea sitchensis] |
GenBank | ABK23371.1 | 0 | 1 | 230 | 1 | 230 | unknown [Picea sitchensis] |
GenBank | ABK23908.1 | 0 | 1 | 230 | 1 | 231 | unknown [Picea sitchensis] |
GenBank | ACN39919.1 | 0 | 1 | 230 | 1 | 231 | unknown [Picea sitchensis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hbh_A | 0 | 27 | 230 | 1 | 204 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3hbe_X | 0 | 27 | 230 | 1 | 204 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3hbd_A | 0 | 27 | 230 | 1 | 204 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
PDB | 2cjl_B | 0 | 52 | 230 | 17 | 204 | A Chain A, Crystal Structure And Enzymatic Properties Of A Bacterial Family 19 Chitinase Reveal Differences With Plant Enzymes |
PDB | 2cjl_A | 0 | 52 | 230 | 17 | 204 | A Chain A, Crystal Structure And Enzymatic Properties Of A Bacterial Family 19 Chitinase Reveal Differences With Plant Enzymes |