y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H00455.2 |
Family | GH19 |
Protein Properties | Length: 323 Molecular Weight: 35717.7 Isoelectric Point: 5.9541 |
Chromosome | Chromosome/Scaffold: 8 Start: 6020393 End: 6023925 |
Description | Chitinase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH19 | 61 | 299 | 0 |
ISDIFQTYQFENLFSKRNSPVAHAVGFWDYQSFILSAALYEPLGFGTTGNTTMQMMEVAAFLGHVGAKTSCGYGVATGGPLAWGLCYNREMSPSQSYCDD YYKLTFPCAPGAEYYGRGALPIYWNYNYGYIGEALKEDLLNHPEYIEQNATLAFMAAMHKWMTPVKKSQPSPHDVFVGNWKPTKNDTLAKRVPGFGTTMN ILYGDQVCGKGDIDDMNVIVSHYLYYLDLMGVGREEAGP |
Full Sequence |
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Protein Sequence Length: 323 Download |
MEEMRRAIWV ILATAVLASS VMVGVRGDDT KTLVKKVKGQ KVCIKGWECS TWSKYCCNET 60 ISDIFQTYQF ENLFSKRNSP VAHAVGFWDY QSFILSAALY EPLGFGTTGN TTMQMMEVAA 120 FLGHVGAKTS CGYGVATGGP LAWGLCYNRE MSPSQSYCDD YYKLTFPCAP GAEYYGRGAL 180 PIYWNYNYGY IGEALKEDLL NHPEYIEQNA TLAFMAAMHK WMTPVKKSQP SPHDVFVGNW 240 KPTKNDTLAK RVPGFGTTMN ILYGDQVCGK GDIDDMNVIV SHYLYYLDLM GVGREEAGPN 300 EILSCAEQVA FNPITSSPSS SS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00182 | Glyco_hydro_19 | 2.0e-63 | 69 | 305 | 237 | + Chitinase class I. | ||
cd00325 | chitinase_glyco_hydro_19 | 3.0e-95 | 65 | 305 | 241 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. |
Gene Ontology | |
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GO Term | Description |
GO:0004568 | chitinase activity |
GO:0006032 | chitin catabolic process |
GO:0016998 | cell wall macromolecule catabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08775.1 | 0 | 6 | 320 | 5 | 319 | Glycoside hydrolase, family 19 [Medicago truncatula] |
GenBank | ACU19724.1 | 0 | 29 | 322 | 37 | 329 | unknown [Glycine max] |
RefSeq | XP_002269474.1 | 0 | 26 | 319 | 22 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276563.1 | 0 | 3 | 311 | 2 | 309 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002515664.1 | 0 | 1 | 322 | 1 | 321 | chitinase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3cql_B | 0 | 61 | 311 | 2 | 242 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 3cql_A | 0 | 61 | 311 | 2 | 242 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
PDB | 3w3e_B | 0 | 61 | 311 | 3 | 241 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
PDB | 3w3e_A | 0 | 61 | 311 | 3 | 241 | A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall |
PDB | 1cns_B | 0 | 60 | 293 | 1 | 229 | A Chain A, Crystal Structure Of Chitinase At 1.91a Resolution |