y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os01g56810.1 |
Family | AA7 |
Protein Properties | Length: 535 Molecular Weight: 58202 Isoelectric Point: 6.0571 |
Chromosome | Chromosome/Scaffold: 1 Start: 32788487 End: 32792750 |
Description | cytokinin oxidase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 57 | 255 | 2.2e-24 |
RLTSAEPLAVFHPRGAGDVAALVKAAYGSASGIRVSARGHGHSISGQAQAAGGVVVDMSHGWRAEAAERTLPVYSPALGGHYIDVWGGELWIDVLNWTLA HGGLAPRSWTDYLYLSVGGTLSNAGISGQAFHHGPQISNVYELDVVTGKGEVVTCSESNNPDLFFGALGGLGQLGIITRARIALEPAPHRVRWIRALYS |
Full Sequence |
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Protein Sequence Length: 535 Download |
MAWCLVFMVF LIYCLISTVG LPVAPADEAA MQLGGVGGGR LSVEPSDVME ASLDFGRLTS 60 AEPLAVFHPR GAGDVAALVK AAYGSASGIR VSARGHGHSI SGQAQAAGGV VVDMSHGWRA 120 EAAERTLPVY SPALGGHYID VWGGELWIDV LNWTLAHGGL APRSWTDYLY LSVGGTLSNA 180 GISGQAFHHG PQISNVYELD VVTGKGEVVT CSESNNPDLF FGALGGLGQL GIITRARIAL 240 EPAPHRVRWI RALYSNFTEF TADQERLISL QHGGRRFDYV EGFVVAAEGL INNWRSSFFS 300 PQNPVKLSSL KHHSGVLYCL EVTKNYDDST AVTVDQDVEA LLGELNFIPG TVFTTDLPYV 360 DFLDRVHKAE LKLRGKGMWE VPHPWLNLFV PASRIADFDR GVFRGVLGSR TAGGPILIYP 420 MNRHKWDPRS SVVTPEEDVF YLVAFLRSAV PGSTDPAQSL EALERQNREI LEFCDEAGIG 480 AKQYLPNHKA QREWEAHFGA RWARFARLKA EFDPRAMLAT GQGIFDSPPL LAES* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01679 | bact_FAD_ox | 7.0e-6 | 61 | 253 | 199 | + FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. | ||
COG0277 | GlcD | 1.0e-19 | 36 | 514 | 485 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam01565 | FAD_binding_4 | 6.0e-25 | 63 | 212 | 152 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
pfam09265 | Cytokin-bind | 3.0e-171 | 244 | 525 | 283 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
PLN02441 | PLN02441 | 0 | 1 | 529 | 530 | + cytokinin dehydrogenase |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005576 | extracellular region |
GO:0008152 | metabolic process |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0009056 | catabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ13725.1 | 0 | 1 | 427 | 1 | 427 | hypothetical protein OsJ_03648 [Oryza sativa Japonica Group] |
GenBank | EAZ13725.1 | 0 | 336 | 534 | 431 | 629 | hypothetical protein OsJ_03648 [Oryza sativa Japonica Group] |
RefSeq | NP_001044409.1 | 0 | 1 | 534 | 1 | 534 | Os01g0775400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002280797.1 | 0 | 6 | 534 | 5 | 523 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002458582.1 | 0 | 1 | 534 | 1 | 548 | hypothetical protein SORBIDRAFT_03g036160 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1w1s_A | 0 | 25 | 526 | 35 | 534 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1w1r_A | 0 | 25 | 526 | 35 | 534 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1w1q_A | 0 | 25 | 526 | 35 | 534 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1w1o_A | 0 | 25 | 526 | 35 | 534 | A Chain A, Native Cytokinin Dehydrogenase |
PDB | 3s1d_A | 0 | 25 | 526 | 17 | 516 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
cytokinins degradation | RXN-4621 | EC-1.5.99 | isopentenyladenine:FAD oxidoreductase |