No AFmodels/IMGVR_UViG_3300010214_000044|3300010214|Ga0136260_10022623-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS362
Inhibited defense system
CLAN ID CLAN001
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
IMGVR_UViG_3300010214_000044|3300010214|Ga0136260_10022623
gene_page: 153 17278.8 6.4771 0
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF11195,PF21825
Phrog phrog_2231,phrog_372,phrog_1538,phrog_327,phrog_6102
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending Thoeris because it belongs to the same clan as family APIS024,APIS029,APIS211,APIS245,APIS283,APIS315,APIS356,APIS372,APIS373,APIS378 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS362 IMGVR_UViG_3300010214_000044|3300010214|Ga0136260_10022623 11 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN001

APIS362 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_3300010214_000044|3300010214|Ga0136260_10022623 100.000 2.754E-98 310 1.000% Comamonas IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_2889482124_000004|2889482124|2889483689 74.700 5.760E-72 234 0.994% Lampropedia aestuarii IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_2739367512_000001|2739367512|2739412373 83.800 1.759E-83 267 0.994% Comamonas sp002754475 IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_2898748948_000004|2898748948|2898750147 74.300 1.485E-71 233 0.994% Comamonas thiooxydans IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_2898757180_000001|2898757180|2898757270 95.700 2.008E-98 310 0.994% Comamonas testosteroni IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_2898762732_000004|2898762732|2898766588 94.600 4.717E-97 306 0.994% Comamonas testosteroni IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_2645727519_000006|2645727519|2645809487 90.900 2.161E-92 293 0.994% Comamonas thiooxydans IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_2561511126_000003|2561511126|2562173635 90.200 1.436E-91 290 0.994% Comamonas thiooxydans IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_2645727892_000011|2645727892|2647432634 90.000 2.700E-91 289 0.994% Comamonas thiooxydans IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_3300036944_000689|3300036944|Ga0377190_000235_12970_13449 63.800 7.299E-61 202 0.994% Burkholderiaceae IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102
IMGVR_UViG_3300024935_000002|3300024935|Ga0208758_10007933 67.700 4.516E-66 217 0.994% IMGVR PF11195 phrog_2231 phrog_372 phrog_1538 phrog_327 phrog_6102