dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS344

Inhibited defense system

CLAN ID

CLAN001

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300020576_005179\|3300020576\|Ga0212216_1000009333	gene_page:	80	9106.57	7.0097	0.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF21825

Phrog

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Thoeris because it belongs to the same clan as family APIS024,APIS029,APIS211,APIS245,APIS283,APIS315,APIS356,APIS372,APIS373,APIS378 which has seed protein.

Fam ID	Seed protein	Member count	Model	Alignment
APIS344	IMGVR_UViG_3300020576_005179\|3300020576\|Ga0212216_1000009333	3	HMM model	Member alignment

APIS344 has no similar APIS family.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300020576_005179\|3300020576\|Ga0212216_1000009333	100.000	3.238E-49	164	1.000%	IMGVR	PF21825	phrog_761 phrog_1762 phrog_746 phrog_5302 phrog_2331
IMGVR_UViG_3300041955_000110\|3300041955\|Ga0455671_0004499_9976_10257	37.300	6.641E-12	57	0.962%	IMGVR	PF21825	phrog_761 phrog_1762 phrog_746 phrog_5302 phrog_2331
IMGVR_UViG_3300037235_000018\|3300037235\|Ga0372959_0000832_22484_22834	45.000	3.257E-11	55	0.775%	IMGVR	PF21825	phrog_761 phrog_1762 phrog_746 phrog_5302 phrog_2331