dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS341

Inhibited defense system

CLAN ID

CLAN001

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
MGV-GENOME-0345538_120	gene_page:	77	8986.54	7.9939	1.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF21825

Phrog

phrog_3545,phrog_206,phrog_5156,phrog_5023,phrog_6160

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Thoeris because it belongs to the same clan as family APIS024,APIS029,APIS211,APIS245,APIS283,APIS315,APIS356,APIS372,APIS373,APIS378 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS341	MGV-GENOME-0345538_120	18	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN001

APIS341 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
MGV-GENOME-0345538_120	100.000	3.895E-45	152	1.000%	Bacteroidaceae	MGV	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
MGV-GENOME-0295936_14	88.800	1.391E-33	119	0.808%	Bacteroides	MGV	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
MGV-GENOME-0193688_8	82.300	2.214E-31	113	0.833%	Bacteroides	MGV	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300007288_000118\|3300007288\|Ga0104346_10003783	84.300	1.755E-32	116	0.833%	Bacteroidaceae	IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300006523_000172\|3300006523\|Ga0101039_10029928	79.200	9.933E-30	108	0.833%	Bacteroidaceae	IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300007797_000259\|3300007797\|Ga0105663_100014140	57.600	1.825E-17	73	0.808%	Bacteroides	IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
MGV-GENOME-0309520_26	60.000	4.036E-19	78	0.821%	Bacteroides	MGV	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300030084_000079\|3300030084\|Ga0237953_10002031	88.800	1.391E-33	119	0.808%	Bacteroides	IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300029313_000097\|3300029313\|Ga0242781_100008246	57.600	1.825E-17	73	0.808%	Bacteroides	IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
uvig_332344_47	93.100	2.838E-45	153	0.987%	Bacteroides massiliensis	GPD	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
uvig_155567_11	86.400	1.391E-33	119	0.833%		GPD	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300045988_123200\|3300045988\|Ga0495776_168504_2658_2855	82.300	2.214E-31	113	0.833%	Bacteroidaceae	IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
uvig_192761_30	84.300	1.755E-32	116	0.833%		GPD	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
MGV-GENOME-0301992_30	86.400	1.391E-33	119	0.833%	Bacteroides	MGV	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300029614_000341\|3300029614\|Ga0245155_10044740	79.200	9.933E-30	108	0.833%		IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300045988_174862\|3300045988\|Ga0495776_047207_17969_18163	60.000	4.036E-19	78	0.821%	Bacteroides	IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300045988_151018\|3300045988\|Ga0495776_029573_40107_40376	80.500	9.524E-37	128	0.974%	Bacteroidaceae	IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160
IMGVR_UViG_3300008497_000010\|3300008497\|Ga0111011_10015232	80.500	9.524E-37	128	0.974%	Bacteroides	IMGVR	PF21825	phrog_3545 phrog_206 phrog_5156 phrog_5023 phrog_6160