dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS333

Inhibited defense system

CLAN ID

CLAN001

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300021440_000023\|3300021440\|Ga0213919_100006562	gene_page:	145	16406.5	4.6983	-6

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF21825

Phrog

phrog_4747,phrog_168,phrog_7,phrog_1297,phrog_1283

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Thoeris because it belongs to the same clan as family APIS024,APIS029,APIS211,APIS245,APIS283,APIS315,APIS356,APIS372,APIS373,APIS378 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS333	IMGVR_UViG_3300021440_000023\|3300021440\|Ga0213919_100006562	19	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN001

APIS333 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_3300021440_000023\|3300021440\|Ga0213919_100006562	100.000	1.302E-98	310	1.000%		IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_3300014830_000032\|3300014830\|Ga0119906_10009572	48.700	4.267E-36	130	0.979%	Rhodocyclaceae	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_3300006417_000161\|3300006417\|Ga0069787_1010283223	45.300	3.995E-32	119	0.979%		IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_3300038816_000083\|3300038816\|Ga0119929_00139_9183_9593	48.700	4.267E-36	130	0.979%	UBA2383	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_3300005680_000068\|3300005680\|Ga0074429_100034140	48.700	4.267E-36	130	0.979%	Gammaproteobacteria	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_3300048591_000025\|3300048591\|Ga0498929_0017544_2181_2591	48.900	2.271E-36	131	0.979%		IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_3300025309_000435\|3300025309\|Ga0209212_100055631	63.900	3.798E-55	185	1.000%		IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_2687453271_000002\|2687453271\|2688133407	43.900	2.648E-31	116	1.000%	Comamonas thiooxydans	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_648276631_000006\|648276631\|648618993	45.100	1.132E-32	120	1.000%	Comamonas thiooxydans	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_2630968527_000005\|2630968527\|2632163245	44.900	1.552E-32	120	1.000%	Comamonas testosteroni	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_3300031088_000511\|3300031088\|Ga0308157_1000145914	44.800	2.127E-32	119	1.000%		IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_2636415606_000001\|2636415606\|2637253379	45.100	1.132E-32	120	1.000%	Comamonas thiooxydans	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_2744054452_000003\|2744054452\|2744289409	43.700	4.974E-31	115	1.000%	Comamonas thiooxydans	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_2528311002_000009\|2528311002\|2528324732	43.900	1.162E-29	111	0.959%	Comamonas testosteroni	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_2744054452_000005\|2744054452\|2744291370	43.600	6.817E-31	115	1.000%	Comamonas thiooxydans	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_2528311002_000010\|2528311002\|2528325748	44.900	1.552E-32	120	1.000%	Comamonas testosteroni	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_2556793030_000002\|2556793030\|2556895875	44.300	1.029E-31	117	1.000%	Comamonas testosteroni	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_2615840615_000005\|2615840615\|2616260763	44.600	3.995E-32	119	1.000%	Comamonas thiooxydans	IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283
IMGVR_UViG_3300005325_000020\|3300005325\|Ga0074199_10011642	45.200	1.932E-31	117	0.966%		IMGVR	PF21825	phrog_4747 phrog_168 phrog_7 phrog_1297 phrog_1283