dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS332

Inhibited defense system

CLAN ID

CLAN001

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300046804_000918\|3300046804\|Ga0485268_005100_2621_2824	gene_page:	67	7982.09	7.0075	0.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF21825

Phrog

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Thoeris because it belongs to the same clan as family APIS024,APIS029,APIS211,APIS245,APIS283,APIS315,APIS356,APIS372,APIS373,APIS378 which has seed protein.

Fam ID	Seed protein	Member count	Model	Alignment
APIS332	IMGVR_UViG_3300046804_000918\|3300046804\|Ga0485268_005100_2621_2824	4	HMM model	Member alignment

APIS332 has no similar APIS family.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_3300046804_000918\|3300046804\|Ga0485268_005100_2621_2824	100.000	5.499E-37	128	1.000%		IMGVR	PF21825	phrog_4197 phrog_1041 phrog_7507 phrog_3171 phrog_2331
IMGVR_UViG_3300010392_005371\|3300010392\|Ga0118731_10381371120	45.300	4.671E-11	54	0.925%		IMGVR	PF21825	phrog_4197 phrog_1041 phrog_7507 phrog_3171 phrog_2331
IMGVR_UViG_2728369168_000001\|2728369168\|2729476331	45.600	4.355E-10	51	0.866%	Celeribacter halophilus	IMGVR	PF21825	phrog_4197 phrog_1041 phrog_7507 phrog_3171 phrog_2331
IMGVR_UViG_3300044223_000047\|3300044223\|Ga0451488_000792_9715_9942	50.300	2.652E-12	57	0.866%		IMGVR	PF21825	phrog_4197 phrog_1041 phrog_7507 phrog_3171 phrog_2331