No AFmodels/IMGVR_UViG_3300027652_000006|3300027652|Ga0209007_100026531-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS302
Inhibited defense system
CLAN ID CLAN001
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
IMGVR_UViG_3300027652_000006|3300027652|Ga0209007_100026531
gene_page: 144 16203.4 5.7865 -1
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF21825
Phrog phrog_196,phrog_4406,phrog_5313,phrog_412,phrog_430
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending Thoeris because it belongs to the same clan as family APIS024,APIS029,APIS211,APIS245,APIS283,APIS315,APIS356,APIS372,APIS373,APIS378 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS302 IMGVR_UViG_3300027652_000006|3300027652|Ga0209007_100026531 3 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN001

APIS302 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_3300027652_000006|3300027652|Ga0209007_100026531 100.000 2.333E-98 309 1.000% IMGVR PF21825 phrog_196 phrog_4406 phrog_5313 phrog_412 phrog_430
IMGVR_UViG_3300044983_000140|3300044983|Ga0453990_0000218_7968_8420 39.300 1.593E-23 94 0.854% IMGVR PF21825 phrog_196 phrog_4406 phrog_5313 phrog_412 phrog_430
IMGVR_UViG_3300005518_000027|3300005518|Ga0070699_10000042152 39.300 1.593E-23 94 0.854% IMGVR PF21825 phrog_196 phrog_4406 phrog_5313 phrog_412 phrog_430