dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS280

Inhibited defense system

CLAN ID

CLAN001

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
MN094788_00234	gene_page:	65	7688.82	5.021	-2

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF21825

Phrog

phrog_4271,phrog_4211,phrog_7158,phrog_1396,phrog_7257

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Thoeris because it belongs to the same clan as family APIS024,APIS029,APIS211,APIS245,APIS283,APIS315,APIS356,APIS372,APIS373,APIS378 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS280	MN094788_00234	20	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN001

APIS280 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	phage	host	SourceDB	Pfam	Phrog
MN094788_00234	100.000	2.870E-38	132	1.000%	Achromobacter phage Motura	Achromobacter	INPHARED	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300036798_000101\|3300036798\|Ga0376672_0000241_14690_14929	39.400	5.094E-09	48	1.000%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300044591_002420\|3300044591\|Ga0453735_0000033_42644_42853	52.900	2.786E-14	63	0.923%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300042561_002100\|3300042561\|Ga0453226_0000010_166684_166893	54.000	7.796E-15	64	0.923%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300046373_000123\|3300046373\|Ga0494103_000250_25655_25867	51.200	2.026E-14	63	0.969%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300045996_000721\|3300045996\|Ga0456371_00002328_9162_9356	54.400	4.445E-16	68	0.969%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300017707_000932\|3300017707\|Ga0181363_10004174	52.800	3.000E-15	66	0.969%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_2821852671_000001\|2821852671\|2821854571	41.900	7.501E-10	50	0.969%		Elizabethkingia meningoseptica	IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_2858197044_000001\|2858197044\|2858198188	40.800	2.690E-09	49	0.969%		Elizabethkingia meningoseptica	IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_2841813427_000002\|2841813427\|2841817118	41.600	1.032E-09	50	0.969%		Elizabethkingia anophelis	IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300020046_005271\|3300020046\|Ga0206646_100054419	43.700	1.521E-10	52	0.969%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300005655_000104\|3300005655\|Ga0073905_100048703	43.700	1.521E-10	52	0.969%		Gammaproteobacteria	IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300020036_003320\|3300020036\|Ga0206648_10036642	43.700	1.521E-10	52	0.969%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300028627_000088\|3300028627\|Ga0302243_10043564				%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300006940_000456\|3300006940\|Ga0079099_15554814				%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300022562_001357\|3300022562\|Ga0247387_1000116127	42.600	1.032E-09	50	0.938%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300046003_006714\|3300046003\|Ga0485178_000229_14506_14712	45.000	3.087E-11	54	0.969%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300031715_000021\|3300031715\|Ga0307476_1000046936	43.100	2.880E-10	51	0.969%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300021181_000019\|3300021181\|Ga0210388_1000027736	45.500	8.623E-12	56	0.969%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257
IMGVR_UViG_3300001920_000004\|3300001920\|Mini_100017114	46.600	4.558E-12	57	0.969%			IMGVR	PF21825	phrog_4271 phrog_4211 phrog_7158 phrog_1396 phrog_7257