dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS203

Inhibited defense system

CLAN ID

CLAN001

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300020045_010743\|3300020045\|Ga0206662_10111955	gene_page:	69	8066.19	6.4453	0

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF21825

Phrog

phrog_6102,phrog_8689,phrog_123,phrog_7140,phrog_3590

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Thoeris because it belongs to the same clan as family APIS024,APIS029,APIS211,APIS245,APIS283,APIS315,APIS356,APIS372,APIS373,APIS378 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS203	IMGVR_UViG_3300020045_010743\|3300020045\|Ga0206662_10111955	13	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN001

APIS203 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_3300020045_010743\|3300020045\|Ga0206662_10111955	100.000	1.913E-42	144	1.000%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300046323_000149\|3300046323\|Ga0456308_0000095_7513_7713	48.900	1.542E-12	58	0.884%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300034112_001144\|3300034112\|Ga0335066_0001174_1784_2026	47.000	4.314E-13	60	0.957%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300035661_000169\|3300035661\|Ga0373633_0001731_8397_8639	47.500	2.282E-13	61	0.957%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300020037_004339\|3300020037\|Ga0206644_10109275	47.500	2.282E-13	61	0.957%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300005805_000191\|3300005805\|Ga0079957_100036647				%	Burkholderiaceae	IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300044729_002689\|3300044729\|Ga0453742_0018886_3999_4256	38.800	2.199E-08	46	0.942%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300047299_000180\|3300047299\|Ga0466522_000173_20756_20998	47.300	3.137E-13	60	0.957%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300042355_001831\|3300042355\|Ga0453942_0016538_2762_3004	46.000	1.542E-12	58	0.957%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300025896_000161\|3300025896\|Ga0208916_1000025127	42.000	1.335E-10	53	0.971%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300034112_002310\|3300034112\|Ga0335066_0005926_5518_5742	45.500	2.916E-12	57	0.957%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300006805_003124\|3300006805\|Ga0075464_100074413	42.000	1.335E-10	53	0.971%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590
IMGVR_UViG_3300010944_000202\|3300010944\|Ga0138501_1002252	47.500	2.282E-13	61	0.957%		IMGVR	PF21825	phrog_6102 phrog_8689 phrog_123 phrog_7140 phrog_3590