y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si025803m |
Family | GT90 |
Protein Properties | Length: 336 Molecular Weight: 38176.5 Isoelectric Point: 6.505 |
Chromosome | Chromosome/Scaffold: 3 Start: 2313468 End: 2314873 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 42 | 289 | 0 |
RVPDVDLMFDCMDKPAVNRTEHGDGDPAAPPPPPLFRYCTTRDHFDIPFPDWSFWGWPETNIEPWSREFKSIKAGAKATKWVDRVPTAYWKGNPDVASPL RVALLGCNDTGLWRAEIMRQNWTDEAKAGYQHSKLSSQCTHRYKIYAEGFAWSVSLKYILSCGSMALLIDPQYEDFFSRGLDPRVNYWPVSRVGMCESIR DAVDWGNANSAEAERVGRRGQRLMQDLSMAAVYDYMLHLLTEYAALMD |
Full Sequence |
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Protein Sequence Length: 336 Download |
MRVTITGGGR RLHVDLYYAC VQSRALFTVW SLLQLMRRYP GRVPDVDLMF DCMDKPAVNR 60 TEHGDGDPAA PPPPPLFRYC TTRDHFDIPF PDWSFWGWPE TNIEPWSREF KSIKAGAKAT 120 KWVDRVPTAY WKGNPDVASP LRVALLGCND TGLWRAEIMR QNWTDEAKAG YQHSKLSSQC 180 THRYKIYAEG FAWSVSLKYI LSCGSMALLI DPQYEDFFSR GLDPRVNYWP VSRVGMCESI 240 RDAVDWGNAN SAEAERVGRR GQRLMQDLSM AAVYDYMLHL LTEYAALMDF RPVPPPTAQE 300 ACEGSVLCLA DDKQRRFLEA SAAEPAVDEP CVLKW* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 4.0e-20 | 247 | 333 | 89 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 3.0e-57 | 2 | 147 | 146 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 2.0e-94 | 42 | 290 | 258 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF85344.1 | 0 | 1 | 333 | 100 | 432 | unknown [Zea mays] |
GenBank | ACF87853.1 | 0 | 1 | 333 | 145 | 477 | unknown [Zea mays] |
RefSeq | NP_001151574.1 | 0 | 1 | 333 | 145 | 477 | lipopolysaccharide-modifying protein [Zea mays] |
RefSeq | XP_002299807.1 | 0 | 1 | 334 | 7 | 332 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002439287.1 | 0 | 1 | 333 | 151 | 492 | hypothetical protein SORBIDRAFT_09g003810 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL750643 | 205 | 130 | 333 | 0 |
DY233055 | 221 | 115 | 332 | 0 |
DR831026 | 217 | 119 | 332 | 0 |
FL799000 | 197 | 138 | 333 | 0 |
DT638986 | 277 | 54 | 330 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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