y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00063538m |
Family | GT90 |
Protein Properties | Length: 288 Molecular Weight: 32424.5 Isoelectric Point: 8.2001 |
Chromosome | Chromosome/Scaffold: 0222432 Start: 98 End: 961 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 149 | 286 | 2.8e-31 |
RVPDLDLMFFCDDTPVVHAAAYPDPSVAPPLFMYCKNDSALGIVFPDWTFWGWPEVNIRPWAPFLEEVERESRRVPWHYREPYAFWKGNPDVGGLRSDLM RCNGSDWNARLVRQDWEDADRNGFKDSNLAKQCTYRYG |
Full Sequence |
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Protein Sequence Length: 288 Download |
MQFILLGSTA SGSSRNGGRP GHRTPSSAAP RIPILITCSN ETTSEFHTCP SAATTCPSPS 60 ASSSSSKQRP APSTTTCPEY FRFIHSDLSP WRDAGITREA VERARDKATF RLVVVAGRAY 120 VDKYRPAFQT RDVFTLWGIL QLLARYPGRV PDLDLMFFCD DTPVVHAAAY PDPSVAPPLF 180 MYCKNDSALG IVFPDWTFWG WPEVNIRPWA PFLEEVERES RRVPWHYREP YAFWKGNPDV 240 GGLRSDLMRC NGSDWNARLV RQDWEDADRN GFKDSNLAKQ CTYRYGI* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00672 | CAP10 | 6.0e-49 | 149 | 287 | 150 | + Putative lipopolysaccharide-modifying enzyme. | ||
pfam05686 | Glyco_transf_90 | 2.0e-90 | 73 | 241 | 170 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001060764.1 | 0 | 22 | 287 | 127 | 393 | Os08g0101800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149452.1 | 0 | 20 | 287 | 140 | 413 | LOC100283078 [Zea mays] |
RefSeq | XP_002437850.1 | 0 | 5 | 287 | 94 | 375 | hypothetical protein SORBIDRAFT_10g003730 [Sorghum bicolor] |
RefSeq | XP_002443683.1 | 0 | 80 | 287 | 198 | 408 | hypothetical protein SORBIDRAFT_07g000280 [Sorghum bicolor] |
RefSeq | XP_002454569.1 | 0 | 25 | 287 | 109 | 365 | hypothetical protein SORBIDRAFT_04g033620 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EC874047 | 213 | 77 | 287 | 0 |
DV167254 | 221 | 73 | 287 | 0 |
DV150888 | 219 | 74 | 287 | 0 |
HS556713 | 228 | 68 | 287 | 0 |
GW835252 | 224 | 69 | 287 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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