y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra039310 |
Family | GT90 |
Protein Properties | Length: 433 Molecular Weight: 50527.5 Isoelectric Point: 8.9757 |
Chromosome | Chromosome/Scaffold: 04 Start: 18659784 End: 18661758 |
Description | downstream target of AGL15 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 197 | 315 | 5.4e-30 |
RLPDLELMFDANDRPTVRSNDYRGQQHPAPPPIFRYCSDDASLDIVFPDWSFWGWAEVNIKPWAKSMVAIQEGNKMTPWKDRVAYAYWRGNPNVAPTRRD LLTCNVSDQQDWNTRLYIN |
Full Sequence |
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Protein Sequence Length: 433 Download |
MLQRKSMKRN NNSDTLTNRH ASLKTTSYPG KRIAKATLFF VSCLFISAGL LDLLGCFDST 60 TFAGLKQVTT IRKQPITTHH KFPDQCDVVQ NQTQQQQERQ QLPMSEDGTK NDKARSSHSR 120 PSTCPSYFRW IHEDLRPWRE TGITRGMLEK ARNNKAHFRV IILDGKVYVK KYRKSIDTRD 180 VFTLWGILQL LRWYPGRLPD LELMFDANDR PTVRSNDYRG QQHPAPPPIF RYCSDDASLD 240 IVFPDWSFWG WAEVNIKPWA KSMVAIQEGN KMTPWKDRVA YAYWRGNPNV APTRRDLLTC 300 NVSDQQDWNT RLYINARKIG EEGSRYIREE VNIEHVYDYM FHLMNEYAKL LKFKPEIPWG 360 ATEITPDSMG CPATGRWRDF MEESMVMSPC EVSPCEMPLP YSPVELREVL ERKANATRQV 420 ELWEDQYYSN KP* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00672 | CAP10 | 3.0e-10 | 316 | 354 | 39 | + Putative lipopolysaccharide-modifying enzyme. | ||
smart00672 | CAP10 | 5.0e-53 | 197 | 334 | 141 | + Putative lipopolysaccharide-modifying enzyme. | ||
pfam05686 | Glyco_transf_90 | 8.0e-157 | 119 | 424 | 306 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28541.1 | 0 | 20 | 314 | 15 | 302 | unknown protein [Arabidopsis thaliana] |
GenBank | AAC28541.1 | 0 | 308 | 430 | 388 | 510 | unknown protein [Arabidopsis thaliana] |
DDBJ | BAF00020.1 | 0 | 111 | 314 | 1 | 203 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_182107.3 | 0 | 1 | 314 | 1 | 308 | DTA2 (DOWNSTREAM TARGET OF AGL15 2) [Arabidopsis thaliana] |
RefSeq | NP_182107.3 | 0 | 308 | 430 | 394 | 516 | DTA2 (DOWNSTREAM TARGET OF AGL15 2) [Arabidopsis thaliana] |