y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00000938m |
Family | GT90 |
Protein Properties | Length: 502 Molecular Weight: 57000.1 Isoelectric Point: 9.3884 |
Chromosome | Chromosome/Scaffold: 0102765 Start: 588 End: 3533 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 176 | 424 | 0 |
RVPDLDLMFDTVDWPVVRTHLYRGKYAGVMPPLFRYCGDDRTLDIVFPDWSFWGWPEINIKPWHALQEDLKDGNNRARWMDREPYAYWKGNPSVSATRQE LVKCNVSSTQDWNARIYAQDWFKESKAGYKDSDLGSQCSHRYKIYIEGSAWSISQKYILACDSMTLLVTPKYYDFFSRSLMPIQHYWPVRDDNKCASIKY AVDWGNSHKQLAQRIGKQASNFIQEELSMDQVYDYMLHLLTEYAKLLKF |
Full Sequence |
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Protein Sequence Length: 502 Download |
GRLTRLPTTA AIPAAALHPE AEHPQPLRPS AAAPPPPPHS RPPPPALYSI SCPAPAPNLS 60 HSHPTEPPKT SQTLARALSS PSTCPSSSPG PPPPASPSSN RSCPSYFRFI HEDLRPWRAA 120 GGVTRAMLAR ARLTATFRLV VLGGRAYIQR LRPAFQTRDL FTIWGVLQLL RRYPGRVPDL 180 DLMFDTVDWP VVRTHLYRGK YAGVMPPLFR YCGDDRTLDI VFPDWSFWGW PEINIKPWHA 240 LQEDLKDGNN RARWMDREPY AYWKGNPSVS ATRQELVKCN VSSTQDWNAR IYAQDWFKES 300 KAGYKDSDLG SQCSHRYKIY IEGSAWSISQ KYILACDSMT LLVTPKYYDF FSRSLMPIQH 360 YWPVRDDNKC ASIKYAVDWG NSHKQLAQRI GKQASNFIQE ELSMDQVYDY MLHLLTEYAK 420 LLKFKPTKPP EAVEVCSESL ACQAEGLEKK FLVDSMVKSA HDAGPCDLPP PFSSRELKML 480 KQRRENSVKQ IEMWEQRTLR T* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 4.0e-48 | 373 | 495 | 123 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 3.0e-78 | 106 | 273 | 168 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 9.0e-119 | 176 | 425 | 256 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD41531.1 | 0 | 127 | 501 | 1 | 375 | OSJNBb0020O11.18 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH67462.1 | 0 | 31 | 500 | 67 | 536 | OSIGBa0159I10.7 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001136898.1 | 0 | 48 | 500 | 92 | 545 | hypothetical protein LOC100217055 [Zea mays] |
RefSeq | XP_002446853.1 | 0 | 48 | 499 | 102 | 553 | hypothetical protein SORBIDRAFT_06g023680 [Sorghum bicolor] |
RefSeq | XP_002454569.1 | 0 | 48 | 500 | 93 | 546 | hypothetical protein SORBIDRAFT_04g033620 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE635152 | 253 | 141 | 393 | 0 |
EX132718 | 290 | 165 | 454 | 0 |
EH727898 | 274 | 199 | 472 | 0 |
FE613579 | 242 | 231 | 472 | 0 |
EY819887 | 292 | 166 | 457 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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