| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000143617 |
| Family | GT4 |
| Protein Properties | Length: 474 Molecular Weight: 53844.8 Isoelectric Point: 5.5519 |
| Chromosome | Chromosome/Scaffold: 021292208 Start: 14261 End: 18374 |
| Description | sulfoquinovosyldiacylglycerol 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 266 | 413 | 3.4e-36 |
| EPEKPLIVHVGRLGVEKSLDFLKSVMDRLPEARIAFIGDGPYREDLEKLFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVV GARAGGIPDIIPADQEGKTGFLYDYNDLDDCLSKLQPLLENKELRETI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 474 Download |
| MTITEVEIEE KEVEEGPPPY VESEINSRPR RIALFVEPSP FAESESGIRE IRYFLYGQLX 60 LGWYLNFLIG MLSHMLSPKV HMLPHLPMWI FRVLGLNDPR YERGVEYVSG YKNRFQNFIR 120 YLREMGDEVM VVTTHEGVPD EFYGAKLIGS RSFPCPLYQK VPLSLALSPR IISEVAQFKP 180 DIIHASSPGI MIYPEIHLQL AGETHVVGHK AADLTLVPSA AISKDLLEAG VAAANTIRLW 240 NKGVDSESFN PRFRSHEMRI RLSNGEPEKP LIVHVGRLGV EKSLDFLKSV MDRLPEARIA 300 FIGDGPYRED LEKLFEGMPA VFTGMLGGEE LSQAYASGDV FVMPSESETL GLVVLEAMSS 360 GIPVVGARAG GIPDIIPADQ EGKTGFLYDY NDLDDCLSKL QPLLENKELR ETIGRAAREE 420 MEKYDWKAAT RVIRNEQYSD AIWFWRKKRA QFLRPLQWFM KRIFPPTTPE IKYR 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02871 | PLN02871 | 0.002 | 27 | 42 | 16 | + UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | ||
| cd03801 | GT1_YqgM_like | 2.0e-53 | 107 | 431 | 362 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| TIGR00032 | argG | 1.0e-53 | 116 | 425 | 351 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| TIGR00009 | L28 | 4.0e-93 | 108 | 431 | 356 | + ribosomal protein L28. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture and are not included [Protein synthesis, Ribosomal proteins: synthesis and modification]. | ||
| PLN02871 | PLN02871 | 0 | 107 | 469 | 392 | + UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002278868.1 | 0 | 107 | 474 | 42 | 436 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309122.1 | 0.00005 | 1 | 42 | 4 | 42 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309122.1 | 0 | 107 | 465 | 43 | 430 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531354.1 | 0 | 107 | 459 | 43 | 424 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jjm_L | 8e-16 | 156 | 421 | 76 | 365 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_K | 8e-16 | 156 | 421 | 76 | 365 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_J | 8e-16 | 156 | 421 | 76 | 365 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_I | 8e-16 | 156 | 421 | 76 | 365 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_H | 8e-16 | 156 | 421 | 76 | 365 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
