y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10004832 |
Family | GT4 |
Protein Properties | Length: 629 Molecular Weight: 71107.5 Isoelectric Point: 5.4528 |
Chromosome | Chromosome/Scaffold: 426 Start: 157048 End: 162119 |
Description | sulfoquinovosyldiacylglycerol 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 420 | 570 | 1.9e-37 |
NGEPKKPLIVHVGRLGVEKSLECLKTVMDRLPNARIAFVGDGPYREELEKLFEGMPAVFTGMLGGEELSEAYASGDVFVMPSESETLGLVVLEAMSSGIP VVGVRAGGIPDIIPPEQDGKIGFLYSPGDLDECVNKLETLINDHELRETMG |
Full Sequence |
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Protein Sequence Length: 629 Download |
MTITEYIKVE EEEEEGPPLM LDSEANSRPR RIALFVEPSP FAYVSGYKNR FQNFIKYLRE 60 MGDEVMVVTT HEGVPQEFYG AKLIGSRSFP CPWYQKVPLS LALSPRIISE VARFKPDIIH 120 ASSPGIMVFG ALAIAKMLCV PIVMSYHTHV PVYIPRYTFS WLVTPMWMVI SMSAYHLFFL 180 FVESYSWMLY VSEPTIEVVV VFVTRGVSSV ICRWEGSPGS SSVNRADEGE GSSSQDMTIT 240 EYIKVEEEEE DEEESPPLML DSEANSKPRR IALFVEPSPF AYVSGYKNRF QNFIKYLREM 300 GDEVMVVTTH EGVPQEFYGA KLIGSRSFPC PWYQKVPLSL ALSPRIISEV ARFKPDIIHA 360 SSPGIMVFGA LAIAKMLCVP IVMSYHTHVP VYIPRYTFSW LVTPMWMVIK FLHRAADLTN 420 GEPKKPLIVH VGRLGVEKSL ECLKTVMDRL PNARIAFVGD GPYREELEKL FEGMPAVFTG 480 MLGGEELSEA YASGDVFVMP SESETLGLVV LEAMSSGIPV VGVRAGGIPD IIPPEQDGKI 540 GFLYSPGDLD ECVNKLETLI NDHELRETMG IAARLEMEKY DWKAATKVIR NEQYNAAIWF 600 WRKKRAQLLR PLQWLVKRIF PSPEITYR* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR00009 | L28 | 8.0e-32 | 31 | 179 | 149 | + ribosomal protein L28. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture and are not included [Protein synthesis, Ribosomal proteins: synthesis and modification]. | ||
TIGR00032 | argG | 8.0e-59 | 270 | 581 | 368 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
TIGR00009 | L28 | 1.0e-100 | 270 | 585 | 362 | + ribosomal protein L28. This model describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture and are not included [Protein synthesis, Ribosomal proteins: synthesis and modification]. | ||
PLN02871 | PLN02871 | 6.0e-105 | 17 | 170 | 154 | + UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | ||
PLN02871 | PLN02871 | 0 | 256 | 625 | 418 | + UDP-sulfoquinovose:DAG sulfoquinovosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309122.1 | 0 | 1 | 171 | 4 | 171 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002309122.1 | 0 | 234 | 624 | 1 | 433 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323560.1 | 0 | 12 | 170 | 8 | 165 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323560.1 | 0 | 251 | 625 | 8 | 429 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531354.1 | 0 | 259 | 615 | 20 | 424 | glycosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jjm_L | 0.00000000000001 | 452 | 574 | 241 | 362 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_K | 0.00000000000001 | 452 | 574 | 241 | 362 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_J | 0.00000000000001 | 452 | 574 | 241 | 362 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_I | 0.00000000000001 | 452 | 574 | 241 | 362 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_H | 0.00000000000001 | 452 | 574 | 241 | 362 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |