dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS370

Inhibited defense system

CLAN ID

CLAN003

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_2880141355_000006\|2880141355\|2880143565	gene_page:	78	8474.69	7.6734	1

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26760

Phrog

phrog_3869,phrog_1601,phrog_2076,phrog_1345,phrog_2331

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Type I Thoeris,Type II Thoeris because it belongs to the same clan as family APIS288,APIS359,LockinC which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS370	IMGVR_UViG_2880141355_000006\|2880141355\|2880143565	4	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN003

APIS370 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_2880141355_000006\|2880141355\|2880143565	100.000	5.518E-49	163	1.000%	Bacillus thuringiensis	IMGVR	PF26760	phrog_3869 phrog_1601 phrog_2076 phrog_1345 phrog_2331
IMGVR_UViG_3300024999_000040\|3300024999\|Ga0209728_1000030131	85.600	3.782E-41	141	1.000%		IMGVR	PF26760	phrog_3869 phrog_1601 phrog_2076 phrog_1345 phrog_2331
IMGVR_UViG_3300032123_000011\|3300032123\|Ga0326326_1000016011	59.300	6.046E-24	91	0.987%		IMGVR	PF26760	phrog_3869 phrog_1601 phrog_2076 phrog_1345 phrog_2331
IMGVR_UViG_3300049157_000010\|3300049157\|Ga0499542_0000007_4049_4342	60.000	2.334E-24	93	0.987%		IMGVR	PF26760	phrog_3869 phrog_1601 phrog_2076 phrog_1345 phrog_2331