dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS365

Inhibited defense system

CLAN ID

CLAN007

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300035208_002115\|3300035208\|Ga0376279_0000001_638747_639460	gene_page:	237	28472.8	9.5754	12.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF25187

Phrog

phrog_10,phrog_1101,phrog_2083,phrog_794,phrog_4454

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending type III CBASS because it belongs to the same clan as family APIS369 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS365	IMGVR_UViG_3300035208_002115\|3300035208\|Ga0376279_0000001_638747_639460	3	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN007

APIS365 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300035208_002115\|3300035208\|Ga0376279_0000001_638747_639460	100.000	1.027E-166	512	1.000%	IMGVR	PF25187	phrog_10 phrog_1101 phrog_2083 phrog_794 phrog_4454
IMGVR_UViG_3300037067_010608\|3300037067\|Ga0378408_0000404_85115_85828	93.500	4.205E-151	467	1.000%	IMGVR	PF25187	phrog_10 phrog_1101 phrog_2083 phrog_794 phrog_4454
IMGVR_UViG_3300037067_007156\|3300037067\|Ga0378408_0000008_536538_537245	66.300	4.594E-93	299	0.941%	IMGVR	PF25187	phrog_10 phrog_1101 phrog_2083 phrog_794 phrog_4454