No AFmodels/KP313531_00008-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS357
Inhibited defense system
CLAN ID CLAN017
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
KP313531_00008
gene_page: 287 32702.2 6.8684 2.5
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF27024
Phrog phrog_58,phrog_964,phrog_38,phrog_23,phrog_9
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending Retron-Eco9,DarTG1 because it belongs to the same clan as family APIS010,APIS276 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS357 KP313531_00008 3 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN017

APIS357 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
KP313531_00008 100.000 1.279E-193 592 1.000% Citrobacter phage phiCFP-1 Citrobacter INPHARED PF27024 phrog_58 phrog_964 phrog_38 phrog_23 phrog_9
uvig_557579_38 87.800 1.270E-170 526 0.990% GPD PF27024 phrog_58 phrog_964 phrog_38 phrog_23 phrog_9
IMGVR_UViG_3300006879_000146|3300006879|Ga0079226_1000646013 61.600 8.163E-96 310 0.875% IMGVR PF27024 phrog_58 phrog_964 phrog_38 phrog_23 phrog_9