No AFmodels/MGV-GENOME-0245195_22-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS342
Inhibited defense system
CLAN ID CLAN014
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
MGV-GENOME-0245195_22
gene_page: 255 29699.4 5.1771 -6.5
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF25185
Phrog phrog_3547,phrog_326,phrog_4201,phrog_1200,phrog_5311
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending type I Thoeris because it belongs to the same clan as family APIS351 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS342 MGV-GENOME-0245195_22 3 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN014

APIS342 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
MGV-GENOME-0245195_22 100.000 3.702E-170 523 1.000% MGV PF25185 phrog_3547 phrog_326 phrog_4201 phrog_1200 phrog_5311
uvig_187334_42 95.500 8.362E-97 311 0.602% GPD PF25185 phrog_3547 phrog_326 phrog_4201 phrog_1200 phrog_5311
uvig_36569_47 97.000 2.701E-170 523 0.996% GPD PF25185 phrog_3547 phrog_326 phrog_4201 phrog_1200 phrog_5311